RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CD1DP15813 335 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 RSBN1Q5VWQ0 802 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 TMEM236Q5W0B7 351 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 TTC23LQ6PF05 361 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 C16orf59Q7L2K0 433 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC22A9Q8IVM8 553 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 THEM5Q8N1Q8 247 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 SEPT8Q92599 483 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 CCDC126Q96EE4 140 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 UBXN10Q96LJ8 280 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 MUS81Q96NY9 551 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 APOL5Q9BWW9 433 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 SLCO3A1Q9UIG8 710 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 UTS2RQ9UKP6 389 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 PTCH2Q9Y6C5 1203 aa12.31□□□□□ -0.44
PRPF40B-202ENST00000380281 SBF1O95248 1867 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CCDC154A6NI56 674 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 IDH3BO43837 385 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 SEC14L2O76054 403 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 ABCB1P08183 1280 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 GDF5P43026 501 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 MRPS6P82932 125 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 TRIM32Q13049 653 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 RFTN1Q14699 578 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 XAF1Q6GPH4 301 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CCDC81Q6ZN84 652 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 MFSD2AQ8NA29 543 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 GOLM1Q8NBJ4 401 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 LPCAT1Q8NF37 534 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 EGLN2Q96KS0 407 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 AFF4Q9UHB7 1163 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 FXYD1O00168 92 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CBX4O00257 560 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 KMOO15229 486 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 SH3BGRLO75368 114 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 ECI2O75521 394 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 HTR6P50406 440 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 HLCSP50747 726 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 SELPLGQ14242 412 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 MS4A13Q5J8X5 152 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 KIAA0408Q6ZU52 694 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 TMEM86AQ8N2M4 240 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 THUMPD3Q9BV44 507 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CHID1Q9BWS9 393 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 WDR12Q9GZL7 423 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CATSPERZQ9NTU4 200 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 LDB2O43679 373 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 SNX2O60749 519 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 GSNP06396 782 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 UBL4AP11441 157 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 MTHFD2P13995 350 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 ZNF37AP17032 561 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 IFNA8P32881 189 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 RGRP47804 291 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 HK2P52789 917 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 AIF1P55008 147 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 RPS24P62847 133 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 GRB14Q14449 540 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CYBRD1Q53TN4 286 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 SNAP47Q5SQN1 464 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 TMTC4Q5T4D3 741 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 IL27RAQ6UWB1 636 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 OR4L1Q8NH43 312 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 DPF3Q92784 378 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 ZUFSPQ96AP4 578 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 PRKD2Q9BZL6 878 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM124BQ9H5Z6 455 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 CCSER2Q9H7U1 834 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 GPN2Q9H9Y4 310 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 TRIM39Q9HCM9 518 aa12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 POLR3BQ9NW08 1133 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-202ENST00000380281 UPK3BL1B0FP48 263 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 E5RI56 91 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 UPK3BL2E5RIL1 263 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 H0Y858 1186 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 C1RP00736 705 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 HTR1BP28222 390 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ANKS6Q68DC2 871 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 MRNIPQ6NTE8 343 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 ARMC8Q8IUR7 673 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 NATD1Q8N6N6 113 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 FAM86B1Q8N7N1 296 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 PDPRQ8NCN5 879 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
PRPF40B-202ENST00000380281 FBXO32Q969P5 355 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms