RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 LCLAT1Q6UWP7 414 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 DPY19L3Q6ZPD9 716 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 CNBD2Q96M20 576 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 ZMAT2Q96NC0 199 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 DCUN1D5Q9BTE7 237 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 GRIP2Q9C0E4 1043 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 NDEL1Q9GZM8 345 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 TMEM245Q9H330 911 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 XAB2Q9HCS7 855 aaKnown RBP6.47□□□□□ -1.37
NEDD9-202ENST00000379446 CATSPERZQ9NTU4 200 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 KCND3Q9UK17 655 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 SCML2Q9UQR0 700 aa6.47□□□□□ -1.37
NEDD9-202ENST00000379446 PEX14O75381 377 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 RECQL5O94762 991 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-202ENST00000379446 LRIG2O94898 1065 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ABCB1P08183 1280 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-202ENST00000379446 UQCRBP14927 111 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 NFKB1P19838 968 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 SPINK2P20155 84 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 CHI3L1P36222 383 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ELK3P41970 407 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 CXCR3P49682 368 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 TMED10P49755 219 aaKnown RBP6.46□□□□□ -1.37
NEDD9-202ENST00000379446 WNT7BP56706 349 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 AP2B1P63010 937 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ACY1Q03154 408 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ANKRD20A4Q4UJ75 823 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ANKRD22Q5VYY1 191 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 KIAA0895LQ68EN5 471 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 LRRC8BQ6P9F7 803 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 RBM44Q6ZP01 1051 aaKnown RBP6.46□□□□□ -1.37
NEDD9-202ENST00000379446 LRRC49Q8IUZ0 686 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 RAB7BQ96AH8 199 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ASB16Q96NS5 453 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 OLFM3Q96PB7 478 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 TBL1YQ9BQ87 522 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 COMMD8Q9NX08 183 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 SLC17A7Q9P2U7 560 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 ATXN10Q9UBB4 475 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 DUSP12Q9UNI6 340 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 OR1A2Q9Y585 309 aa6.46□□□□□ -1.37
NEDD9-202ENST00000379446 BTN3A1O00481 513 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 LSM1O15116 133 aaKnown RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 TBX10O75333 385 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 POP7O75817 140 aaKnown RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 AOC1P19801 751 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 NT5EP21589 574 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 CLCN4P51793 760 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 DGKQP52824 942 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 INHBCP55103 352 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 CASP9P55211 416 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 RACK1P63244 317 aaKnown RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 CYLC2Q14093 348 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 FAM187BQ17R55 369 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 CNPY1Q3B7I2 92 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 MROH9Q5TGP6 573 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 C12orf40Q86WS4 652 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 NUDCD3Q8IVD9 361 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 OR4K2Q8NGD2 314 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 JOSD2Q8TAC2 188 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 BRSK1Q8TDC3 778 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 GTPBP3Q969Y2 492 aaKnown RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 RAD51AP1Q96B01 352 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 ZNF184Q99676 751 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 SLC6A17Q9H1V8 727 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 TTYH1Q9H313 450 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 MMP17Q9ULZ9 603 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 XIRP1Q702N8 1843 aaKnown RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 MAST2Q6P0Q8 1798 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 PTGESO14684 152 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 MAGEB3O15480 346 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 AQP9O43315 295 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 B4GALT2O60909 372 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 OR6B1O95007 311 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 PRAMEF12O95522 483 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 NADKO95544 446 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 CDH2P19022 906 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 ARHGDIAP52565 204 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 RPP38P78345 283 aaKnown RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 MMRN1Q13201 1228 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 ERV3-1Q14264 604 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 C16orf72Q14CZ0 275 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 HSP90AA5PQ58FG0 334 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 UBE2J2Q8N2K1 259 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 ZADH2Q8N4Q0 377 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 PRR7Q8TB68 274 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 KLHL6Q8WZ60 621 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 USP6NLQ92738 828 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 UBE2E3Q969T4 207 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 SLC6A18Q96N87 628 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 QRFPRQ96P65 431 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 TUBGCP5Q96RT8 1024 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 TMEM120AQ9BXJ8 343 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-202ENST00000379446 TLR6Q9Y2C9 796 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 DLEC1Q9Y238 1755 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 hCG_1818297A0A087WSY0 165 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 GOLGA8QA0A0J9YX86 632 aa6.46□□□□□ -1.38
NEDD9-202ENST00000379446 GOLGA8OA6NCC3 632 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms