RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SLC9B2Q86UD5 537 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 ZBED8Q8IZ13 594 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 PYROXD1Q8WU10 500 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 SH3KBP1Q96B97 665 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 TSPYL1Q9H0U9 437 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 P2RY12Q9H244 342 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 EPB41L5Q9HCM4 733 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 SARS2Q9NP81 518 aaKnown RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 PRDM8Q9NQV8 689 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 LRIT1Q9P2V4 623 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 DMGDHQ9UI17 866 aaKnown RBP13□□□□□ -0.33
CKAP2-202ENST00000378034 PCDHB1Q9Y5F3 818 aa13□□□□□ -0.33
CKAP2-202ENST00000378034 CNOT1A5YKK6 2376 aaKnown RBP12.99□□□□□ -0.33
CKAP2-202ENST00000378034 PIKFYVEQ9Y2I7 2098 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 H3BMM5 538 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 LIN7AO14910 233 aaPredicted RBP12.99□□□□□ -0.33
CKAP2-202ENST00000378034 EML2O95834 649 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 MYF5P13349 255 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
CKAP2-202ENST00000378034 GPR3P46089 330 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 BIRC2Q13490 618 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 NFE2L1Q14494 772 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 NR1D2Q14995 579 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 TRADDQ15628 312 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 ZNF658BQ4V348 819 aaPredicted RBP12.99□□□□□ -0.33
CKAP2-202ENST00000378034 HSP90AA5PQ58FG0 334 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
CKAP2-202ENST00000378034 KIAA0408Q6ZU52 694 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 ANKMY2Q8IV38 441 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 CFAP206Q8IYR0 622 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 SLC37A2Q8TED4 501 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 CERS2Q96G23 380 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 CFAP36Q96G28 342 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 PANX3Q96QZ0 392 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 WDR83Q9BRX9 315 aaKnown RBP12.99□□□□□ -0.33
CKAP2-202ENST00000378034 COG4Q9H9E3 785 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 SAYSD1Q9NPB0 183 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 ZDHHC18Q9NUE0 388 aa12.99□□□□□ -0.33
CKAP2-202ENST00000378034 ESYT3A0FGR9 886 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 RHPN2P1A8MT19 583 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 S1PR4O95977 384 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 ESR1P03372 595 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 GSTA2P09210 222 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 MAZP56270 477 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 HP1BP3Q5SSJ5 553 aaPredicted RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 PTRHD1Q6GMV3 140 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 GALNT7Q86SF2 657 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 SFTPA2Q8IWL1 248 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CNTN4Q8IWV2 1026 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 RBM12BQ8IXT5 1001 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 PNPLA1Q8N8W4 532 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 GSDMBQ8TAX9 411 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 NAT14Q8WUY8 206 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 PATE1Q8WXA2 126 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CCDC74AQ96AQ1 378 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 UCK1Q9HA47 277 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 PLAC1Q9HBJ0 212 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 IL1RAPL1Q9NZN1 696 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 MTRF1LQ9UGC7 380 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 RNF215Q9Y6U7 377 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 GOLGA4Q13439 2230 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 UBA6A0AVT1 1052 aaPredicted RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 KPNA5O15131 536 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 SLC35G4P0C7Q5 338 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 BRAFP15056 766 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 RPL10P27635 214 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 SLC1A2P43004 574 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CD151P48509 253 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CUL1Q13616 776 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 SEPT7Q16181 437 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 PERM1Q5SV97 790 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CYS1Q717R9 158 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 RAB44Q7Z6P3 723 aaPredicted RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 PALM2Q8IXS6 379 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CACTIN-AS1Q8N1I8 211 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 C2CD4AQ8NCU7 369 aaPredicted RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 ELMO1Q92556 727 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CCDC3Q9BQI4 270 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 ABCG4Q9H172 646 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 IARS2Q9NSE4 1012 aaKnown RBP12.98□□□□□ -0.33
CKAP2-202ENST00000378034 POT1Q9NUX5 634 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 CPNE7Q9UBL6 633 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
CKAP2-202ENST00000378034 OPA1O60313 960 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 ERVK-10P10266 1014 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 LEPRP48357 1165 aaKnown RBP12.97□□□□□ -0.33
CKAP2-202ENST00000378034 EIF3BP55884 814 aaKnown RBP12.97□□□□□ -0.33
CKAP2-202ENST00000378034 TUBB4BP68371 445 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 HHEXQ03014 270 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 CTBP1Q13363 440 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 CLPPQ16740 277 aaPredicted RBP12.97□□□□□ -0.33
CKAP2-202ENST00000378034 XKR5Q6UX68 686 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 DENND6AQ8IWF6 608 aa12.97□□□□□ -0.33
CKAP2-202ENST00000378034 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms