RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 RBM4BQ9BQ04 359 aaKnown RBP17.59■□□□□ 0.41
CNTNAP3-204ENST00000377656 RBM4Q9BWF3 364 aaKnown RBP17.59■□□□□ 0.41
CNTNAP3-204ENST00000377656 NUSAP1Q9BXS6 441 aaKnown RBP17.59■□□□□ 0.41
CNTNAP3-204ENST00000377656 ABCB8Q9NUT2 735 aa17.59■□□□□ 0.41
CNTNAP3-204ENST00000377656 CLDN4O14493 209 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 ENPP3O14638 875 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 PGRMC2O15173 223 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 SLC35G6P0C7Q6 338 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 IGFBP5P24593 272 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 RGS8P57771 180 aaPredicted RBP17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 LPIN1Q14693 890 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 PERM1Q5SV97 790 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 FAM92BQ6ZTR7 304 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 PIK3C3Q8NEB9 887 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 GALNT8Q9NY28 637 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 MTRRQ9UBK8 725 aa17.58■□□□□ 0.41
CNTNAP3-204ENST00000377656 C9JVG2 144 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 DNM1LO00429 736 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 SLC1A2P43004 574 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 UBXN11Q5T124 520 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 S100ZQ8WXG8 99 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 KIFC1Q9BW19 673 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 GPN3Q9UHW5 284 aaPredicted RBP17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 PIP5K1BO14986 540 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 SCELO95171 688 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 GPIP06744 558 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 SAGP10523 405 aaPredicted RBP17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 CDH3P22223 829 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 DNASE1L2Q92874 299 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 GAS2L1Q99501 681 aaPredicted RBP17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 PLGRKTQ9HBL7 147 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 MCM8Q9UJA3 840 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 FFAR2O15552 330 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 OR1F1O43749 312 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 ZBTB11O95625 1053 aaPredicted RBP17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 COL6A1P12109 1028 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 HEPACAMQ14CZ8 416 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 SLC5A9Q2M3M2 681 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 ARL10Q8N8L6 244 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 C11orf84Q9BUA3 381 aaPredicted RBP17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 RASSF1Q9NS23 344 aa17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 IFT80Q9P2H3 777 aaPredicted RBP17.58■□□□□ 0.4
CNTNAP3-204ENST00000377656 SLC31A1O15431 190 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 OR5F1O95221 314 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 TBX18O95935 607 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 FABP3P05413 133 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 FAM163BP0C2L3 166 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 TFPIP10646 304 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 CYP4F8P98187 520 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 REP15Q6BDI9 236 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 ESAMQ96AP7 390 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 ROPN1LQ96C74 230 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 ZDHHC4Q9NPG8 344 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 NECTIN3Q9NQS3 549 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 C1orf109Q9NX04 203 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 CCDC85CA6NKD9 419 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 IGFALSP35858 605 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 SRSF11Q05519 484 aaKnown RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 ADGRF1Q5T601 910 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 DENND5AQ6IQ26 1287 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 MSANTD2Q6P1R3 559 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 CHST15Q7LFX5 561 aaPredicted RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 DNAJB7Q7Z6W7 309 aaPredicted RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 GALNT5Q7Z7M9 940 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 DPEP2Q9H4A9 486 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 POLR3BQ9NW08 1133 aaPredicted RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 SLIT2O94813 1529 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 UBE2QL1A1L167 161 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 TNFRSF11BO00300 401 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 BNC1Q01954 994 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 NDUFA5Q16718 116 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 PYDC2Q56P42 97 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 VITQ6UXI7 678 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 THAP5Q7Z6K1 395 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 PARP8Q8N3A8 854 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 LMLNQ96KR4 655 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 OSBPL2Q9H1P3 480 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 KLHL31Q9H511 634 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 MINDY3Q9H8M7 445 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 GNEQ9Y223 722 aaKnown RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 PI15O43692 258 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 NADKO95544 446 aaPredicted RBP17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 ACTR3P61158 418 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 SP2Q02086 613 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 BEND5Q7L4P6 421 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 TMC8Q8IU68 726 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 SUSD3Q96L08 255 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 ZNF599Q96NL3 588 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
CNTNAP3-204ENST00000377656 FADS2P1A8MWK0 482 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 C9IYK1 514 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 FZD9O00144 591 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 IL1R2P27930 398 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 IDH3AP50213 366 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 GJA9P57773 515 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 LDLRAP1Q5SW96 308 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 LIN54Q6MZP7 749 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 LIX1Q8N485 282 aa17.56■□□□□ 0.4
CNTNAP3-204ENST00000377656 OR10H5Q8NGA6 315 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms