RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 FOXD2O60548 495 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 ANXA6P08133 673 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CNPP09543 421 aaKnown RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 PCNAP12004 261 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 EEF1B2P24534 225 aaKnown RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 NFKBIAP25963 317 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CLCN7P51798 805 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ARSFP54793 590 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CRHR2Q13324 411 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 PWP1Q13610 501 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 AAK1Q2M2I8 961 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 RFTN2Q52LD8 501 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 TMEM26Q6ZUK4 368 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 GOLGA7Q7Z5G4 137 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 TERB1Q8NA31 727 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 DOK1Q99704 481 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ARHGAP39Q9C0H5 1083 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ACTL8Q9H568 366 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 TMX2-CTNND1H3BSU7 103 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 IFRD1O00458 451 aaPredicted RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 OR7A17O14581 309 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 LSM1O15116 133 aaKnown RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 GJB5O95377 273 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 ALDH2P05091 517 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 RAP2AP10114 183 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 FLT3LGP49771 235 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 ALDH3A2P51648 485 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 GTF2H2Q13888 395 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 PCBP2Q15366 365 aaKnown RBP eCLIP14.34□□□□□ -0.112e-9■■■□□ 16.3
MSH5-201ENST00000375703 CRY1Q16526 586 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 GTF2H2CQ6P1K8 395 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 STK32CQ86UX6 486 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 CLEC4FQ8N1N0 589 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 FNDC8Q8TC99 324 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 TMBIM1Q969X1 311 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 ZMYM5Q9UJ78 669 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 DHRS7Q9Y394 339 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 H0Y858 1186 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 UPK1AO00322 258 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 GPR39O43194 453 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 RSL1D1O76021 490 aaKnown RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 ELK4P28324 431 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 CCND3P30281 292 aaPredicted RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 SGSHP51688 502 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 TRAF2Q12933 501 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 ABRAXAS2Q15018 415 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 RNF219Q5W0B1 726 aaPredicted RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 C16orf59Q7L2K0 433 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 MILR1Q7Z6M3 343 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 TTC30BQ8N4P2 665 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 PNPT1Q8TCS8 783 aaKnown RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 PDLIM5Q96HC4 596 aaKnown RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 C17orf80Q9BSJ5 609 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 NAA50Q9GZZ1 169 aaKnown RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 TLR9Q9NR96 1032 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 POLR3HQ9Y535 204 aaPredicted RBP14.34□□□□□ -0.11
MSH5-201ENST00000375703 ST14Q9Y5Y6 855 aa14.34□□□□□ -0.11
MSH5-201ENST00000375703 A0A1W2PPW3 197 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 SH3PXD2BA1X283 911 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 H7C0S8 307 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 MAGEB3O15480 346 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 TSPAN3O60637 253 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 S100BP04271 92 aaPredicted RBP14.33□□□□□ -0.12
MSH5-201ENST00000375703 SLC2A4P14672 509 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 GGT1P19440 569 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 HMOX2P30519 316 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 DAG1Q14118 895 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 LINGO4Q6UY18 593 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ITIH5Q86UX2 942 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ABI1Q8IZP0 508 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 STK40Q8N2I9 435 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
MSH5-201ENST00000375703 ZNF583Q96ND8 569 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 TUBA1CQ9BQE3 449 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ING2Q9H160 280 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 IPPKQ9H8X2 491 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ZNHIT2Q9UHR6 403 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 PKP3Q9Y446 797 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 MAGED1Q9Y5V3 778 aaPredicted RBP14.33□□□□□ -0.12
MSH5-201ENST00000375703 SLC30A1Q9Y6M5 507 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ANKRD28O15084 1053 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 B4GAT1O43505 415 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 KCNH1O95259 989 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 POLR2IP36954 125 aaKnown RBP14.33□□□□□ -0.12
MSH5-201ENST00000375703 MTHFRP42898 656 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 PLA2G4EQ3MJ16 856 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 FGD3Q5JSP0 725 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 ADAMTSL2Q86TH1 951 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 AADATQ8N5Z0 425 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 P2RY12Q9H244 342 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.12
MSH5-201ENST00000375703 PRMT5O14744 637 aaPredicted RBP14.32□□□□□ -0.12
MSH5-201ENST00000375703 GSTA4O15217 222 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 FFAR2O15552 330 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 PRSS23O95084 383 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms