RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PCDHB3Q9Y5E6 796 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 BTN3A1O00481 513 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 ESRRBO95718 433 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 RPS17P08708 135 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 HTR7P34969 479 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 ARL1P40616 181 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 RAD23AP54725 363 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 TPD52P55327 224 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 TRIM16LQ309B1 348 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 ENPP6Q6UWR7 440 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 Q6ZSR9 355 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 LRRC49Q8IUZ0 686 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 C8orf59Q8N0T1 100 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 LEMD2Q8NC56 503 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 MBOAT4Q96T53 435 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 GPR21Q99679 349 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 CCDC68Q9H2F9 335 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 ACTL7AQ9Y615 435 aa13.94□□□□□ -0.18
CLCNKA-202ENST00000375692 FAM234BA2RU67 622 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 TYW5A2RUC4 315 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 G3V2T6 193 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 RPP40O75818 363 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 INMTO95050 263 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 UROSP10746 265 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ODC1P11926 461 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 PRKACGP22612 351 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 GSTM2P28161 218 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 MNX1P50219 401 aaPredicted RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 STC1P52823 247 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ERVK-8P63133 956 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 TUBA3CQ13748 450 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 GPNMBQ14956 572 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 SKIV2LQ15477 1246 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 CRY1Q16526 586 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 C6orf141Q5SZD1 244 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 SLC16A12Q6ZSM3 486 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 RBM23Q86U06 439 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 CHDHQ8NE62 594 aaPredicted RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 OR52B6Q8NGF0 335 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 FIG4Q92562 907 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 IGSF8Q969P0 613 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 TAMM41Q96BW9 452 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 SH3YL1Q96HL8 342 aaPredicted RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 CCDC138Q96M89 665 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 PKMYT1Q99640 499 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 PALMDQ9NP74 551 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 TSR3Q9UJK0 312 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 PCTPQ9UKL6 214 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 TNFRSF10BO14763 440 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ITGB1P05556 798 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 RAP2AP10114 183 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ACVRL1P37023 503 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 HK3P52790 923 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ACVR1Q04771 509 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 CHRNB3Q05901 458 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 FXNQ16595 210 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 FAM26DQ5JW98 314 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 SULT1C3Q6IMI6 304 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 LAIR2Q6ISS4 152 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 MSANTD2Q6P1R3 559 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ZFAND4Q86XD8 727 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 ZDHHC13Q8IUH4 622 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 GPR150Q8NGU9 434 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 CDKN2AIPNLQ96HQ2 116 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 DERL2Q9GZP9 239 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 FNDC3AQ9Y2H6 1198 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-202ENST00000375692 PRSS23O95084 383 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 TBX18O95935 607 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 CHEK2O96017 543 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ALDH2P05091 517 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ANXA6P08133 673 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 G6PDP11413 515 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 FSHRP23945 695 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 EIF2B2P49770 351 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 HTR6P50406 440 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 KPNA1P52294 538 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 CD47Q08722 323 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 PRKG2Q13237 762 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 DSC3Q14574 896 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 FAM98BQ52LJ0 330 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 MS4A13Q5J8X5 152 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 RBM48Q5RL73 367 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 METTL23Q86XA0 190 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ZNF683Q8IZ20 524 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ABI1Q8IZP0 508 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ABHD8Q96I13 439 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ZYG11BQ9C0D3 744 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 CCDC90BQ9GZT6 254 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 ACTL8Q9H568 366 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 MAGEL2Q9UJ55 1249 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 BAG5Q9UL15 447 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 OGDHLQ9ULD0 1010 aa13.92□□□□□ -0.18
CLCNKA-202ENST00000375692 PDE10AQ9Y233 779 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms