RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SPAM1P38567 509 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 MED21Q13503 144 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CCNIQ14094 377 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 DMC1Q14565 340 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 ZNF423Q2M1K9 1284 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PIGGQ5H8A4 983 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 HACD2Q6Y1H2 254 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 RPS27LQ71UM5 84 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 SERPINA9Q86WD7 417 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 LEMD2Q8NC56 503 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 GRIN3AQ8TCU5 1115 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SMIM14Q96QK8 99 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 LYSMD1Q96S90 227 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 COQ7Q99807 217 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SLC46A2Q9BY10 475 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 ASB8Q9H765 288 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PLGRKTQ9HBL7 147 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 DNAJC15Q9Y5T4 150 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SH3PXD2BA1X283 911 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CDC7O00311 574 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CFLARO15519 480 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TMCC2O75069 709 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PRAMEF1O95521 474 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 ALPIP09923 528 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 UROSP10746 265 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PTPN2P17706 415 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 DGKAP23743 735 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CD70P32970 193 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PKNOX1P55347 436 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 MYLK3Q32MK0 819 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PITRM1Q5JRX3 1037 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TCHHL1Q5QJ38 904 aaPredicted RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 CCDC81Q6ZN84 652 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 RBM44Q6ZP01 1051 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 FRA10AC1Q70Z53 315 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SPATA19Q7Z5L4 167 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 DHDDSQ86SQ9 333 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SATL1Q86VE3 508 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PCDH20Q8N6Y1 951 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 ZNF784Q8NCA9 323 aaPredicted RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 PIP4K2CQ8TBX8 421 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 EEF1AKMT1Q8WVE0 214 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 LBHD1Q9BQE6 289 aaPredicted RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 CPEB1Q9BZB8 566 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 TNFRSF12AQ9NP84 129 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 EPS15L1Q9UBC2 864 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 HS3ST2Q9Y278 367 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TRBV5-4A0A0C4DH59 114 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 GLYATL1P3A0A0U1RQE8 302 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TRIM38O00635 465 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TXNDC9O14530 226 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 ESRRBO95718 433 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TSPAN12O95859 305 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TSPAN8P19075 237 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CDH3P22223 829 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 HNF1BP35680 557 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PSMD8P48556 350 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CLCN7P51798 805 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 EPHA5P54756 1037 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PSME3P61289 254 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 GRIK2Q13002 908 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 FLOT2Q14254 428 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 KIF19Q2TAC6 998 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 FAM151BQ6UXP7 276 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 GK5Q6ZS86 529 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TPRG1Q6ZUI0 275 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 USP45Q70EL2 814 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 KBTBD6Q86V97 674 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 DDIASQ8IXT1 998 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CPNE9Q8IYJ1 553 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 RIN3Q8TB24 985 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 ZNF641Q96N77 438 aaPredicted RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 TCF25Q9BQ70 676 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 AKTIPQ9H8T0 292 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SARS2Q9NP81 518 aaKnown RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 PLK2Q9NYY3 685 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 TBC1D14Q9P2M4 693 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 ATPIF1Q9UII2 106 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 CRLS1Q9UJA2 301 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 SARDHQ9UL12 918 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 PPIL1Q9Y3C6 166 aa8.1□□□□□ -1.11
UBR4-202ENST00000375224 MTF2Q9Y483 593 aaPredicted RBP8.1□□□□□ -1.11
UBR4-202ENST00000375224 HELZP42694 1942 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 RAD51BO15315 384 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CCL16O15467 120 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 NRP2O60462 931 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 STAMBPO95630 424 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 POP4O95707 220 aaKnown RBP8.09□□□□□ -1.11
UBR4-202ENST00000375224 SRCP12931 536 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 NFATC2Q13469 925 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 RPS6KA2Q15349 733 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 RBBP7Q16576 425 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TTLL9Q3SXZ7 439 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 CMTM8Q8IZV2 173 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 MIER2Q8N344 545 aa8.09□□□□□ -1.11
UBR4-202ENST00000375224 TSPEARQ8WU66 669 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms