RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 WDR93Q6P2C0 686 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 ABRAXAS1Q6UWZ7 409 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 SLC26A11Q86WA9 606 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 GPR156Q8NFN8 814 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 HM13Q8TCT9 377 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 ZDHHC1Q8WTX9 485 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 NAT14Q8WUY8 206 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 CDKL2Q92772 493 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 APOLD1Q96LR9 279 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 PANX3Q96QZ0 392 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 TSSK1BQ9BXA7 367 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 FUT8Q9BYC5 575 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 CDC42EP4Q9H3Q1 356 aaKnown RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 DPEP2Q9H4A9 486 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 SLC32A1Q9H598 525 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 FBXO6Q9NRD1 293 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-202ENST00000374676 LATS2Q9NRM7 1088 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 DLL3Q9NYJ7 618 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 NINJ2Q9NZG7 142 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 ZFATQ9P243 1243 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 TBC1D29Q9UFV1 150 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 DNAJC16Q9Y2G8 782 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 CRYL1Q9Y2S2 319 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 COMMD10Q9Y6G5 202 aa11.16□□□□□ -0.62
HSPG2-202ENST00000374676 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 UBA6A0AVT1 1052 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-202ENST00000374676 FAM159BA6NKW6 160 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 LIN7AO14910 233 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-202ENST00000374676 KPNA5O15131 536 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 TNFSF14O43557 240 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 NOBOXO60393 691 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 C1QAP02745 245 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CKMT1AP12532 417 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CEACAM1P13688 526 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 F3P13726 295 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 SLC2A4P14672 509 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CKMT2P17540 419 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CD9P21926 228 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 GABRB3P28472 473 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 FMO4P31512 558 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 STX2P32856 288 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 PHBP35232 272 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 RPIAP49247 311 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 DUSP3P51452 185 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-202ENST00000374676 MPP1Q00013 466 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 NFE2L1Q14494 772 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 ERCC6LQ2NKX8 1250 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CTSL3PQ5NE16 218 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 IYDQ6PHW0 289 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CNSTQ6PJW8 725 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 XKR5Q6UX68 686 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 FAM83HQ6ZRV2 1179 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CAPN12Q6ZSI9 719 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 SLC35F3Q8IY50 421 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CFAP206Q8IYR0 622 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 NAGSQ8N159 534 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 ARL10Q8N8L6 244 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 OR6C4Q8NGE1 309 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CNDP2Q96KP4 475 aaKnown RBP11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CAMK1GQ96NX5 476 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 TXLNGYQ9BZA5 131 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 OSGEPL1Q9H4B0 414 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 COG4Q9H9E3 785 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 PRDM8Q9NQV8 689 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 SMYD2Q9NRG4 433 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 EVA1BQ9NVM1 165 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 KLHL42Q9P2K6 505 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 FTSJ1Q9UET6 329 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 CORO1CQ9ULV4 474 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-202ENST00000374676 U3KQA8 63 aa11.15□□□□□ -0.62
HSPG2-202ENST00000374676 KIR2DS5A0A0G2JLQ3 304 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 A0A0G2JNG1 304 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 SLC5A10A0PJK1 596 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 KIR2DS3K7RE56 304 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 SNX2O60749 519 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 GPC4O75487 556 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 TRIM16O95361 564 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 EML2O95834 649 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 TUBBP07437 444 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 FAM153BP0C7A2 387 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 MYBL2P10244 700 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 XRCC1P18887 633 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-202ENST00000374676 MCM3P25205 808 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 AOAHP28039 575 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 PBLDP30039 288 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-202ENST00000374676 CD151P48509 253 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 NAB1Q13506 487 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 KIR2DS5Q14953 304 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 TRIP6Q15654 476 aaKnown RBP11.14□□□□□ -0.63
HSPG2-202ENST00000374676 FAM153CQ494X1 144 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 C14orf28Q4W4Y0 310 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 ZNF549Q6P9A3 640 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 TRMT10CQ7L0Y3 403 aaKnown RBP11.14□□□□□ -0.63
HSPG2-202ENST00000374676 SFRP1Q8N474 314 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 ARL14Q8N4G2 192 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 AVL9Q8NBF6 648 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 DEFB124Q8NES8 71 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 FBF1Q8TES7 1133 aa11.14□□□□□ -0.63
HSPG2-202ENST00000374676 ASZ1Q8WWH4 475 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms