RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 EVLQ9UI08 416 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 A0A088AWK7 358 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 E9PBE3 544 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 SLC22A2O15244 555 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 HLA-DPA1P20036 260 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 ATP5F1P24539 256 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 VARSP26640 1264 aaKnown RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 PGGT1BP53609 377 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 KLF10Q13118 480 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CAMK2GQ13555 558 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 ZNF235Q14590 738 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 RFTN1Q14699 578 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 INO80DQ53TQ3 878 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 AGAP9Q5VTM2 703 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 KIAA1324Q6UXG2 1013 aaKnown RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 Q6ZNX1 250 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 NCCRP1Q6ZVX7 275 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 PIWIL4Q7Z3Z4 852 aaKnown RBP14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CILP2Q8IUL8 1156 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 BBS5Q8N3I7 341 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 POU5F2Q8N7G0 328 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CCDC126Q96EE4 140 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 CNDP1Q96KN2 507 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 MRGPRX1Q96LB2 322 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 TTC1Q99614 292 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 IGSF5Q9NSI5 407 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 NCKIPSDQ9NZQ3 722 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 SUN2Q9UH99 717 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 RIMKLBQ9ULI2 386 aa14.11□□□□□ -0.15
HMGA1-203ENST00000374116 ZNF318Q5VUA4 2279 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 MEI4A8MW99 385 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 NPC1O15118 1278 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 GRID2O43424 1007 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 ZBTB14O43829 449 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 KLHL41O60662 606 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 FGF1P05230 155 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 RBP1P09455 135 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 LTA4HP09960 611 aaKnown RBP14.1□□□□□ -0.15
HMGA1-203ENST00000374116 COX4I1P13073 169 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 ADSLP30566 484 aaPredicted RBP14.1□□□□□ -0.15
HMGA1-203ENST00000374116 SLC26A3P40879 764 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 PSMD8P48556 350 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 CCR3P51677 355 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 DGKEP52429 567 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 PRAMEP78395 509 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 SLC25A3Q00325 362 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 APOFQ13790 326 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 MMEL1Q495T6 779 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 CARD16Q5EG05 197 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 RBM20Q5T481 1227 aaKnown RBP14.1□□□□□ -0.15
HMGA1-203ENST00000374116 LSMEM2Q8N112 164 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 OR2AP1Q8NGE2 309 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 AGR3Q8TD06 166 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 ACTRT2Q8TDY3 377 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 CLPTM1LQ96KA5 538 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 OR52B2Q96RD2 323 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 POLMQ9NP87 494 aaPredicted RBP14.1□□□□□ -0.15
HMGA1-203ENST00000374116 SEPT3Q9UH03 358 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 ZDHHC2Q9UIJ5 367 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 NUMA1Q14980 2115 aa14.1□□□□□ -0.15
HMGA1-203ENST00000374116 AURKAO14965 403 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 LEFTY1O75610 366 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 BAG2O95816 211 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 CLPTM1O96005 669 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 PORP16435 677 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-203ENST00000374116 PSMA3P25788 255 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 RECQLP46063 649 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-203ENST00000374116 ARSDP51689 593 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 AQP4P55087 323 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 CSHL1Q14406 222 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 TECRLQ5HYJ1 363 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 HECTD2Q5U5R9 776 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 PTAR1Q7Z6K3 402 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-203ENST00000374116 FAM124AQ86V42 546 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 TMEM126BQ8IUX1 230 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 FAM160A2Q8N612 972 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-203ENST00000374116 CPSF7Q8N684 471 aaKnown RBP14.09□□□□□ -0.15
HMGA1-203ENST00000374116 PCDH20Q8N6Y1 951 aaKnown RBP14.09□□□□□ -0.15
HMGA1-203ENST00000374116 CCNYL1Q8N7R7 359 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 KDM1BQ8NB78 822 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 OR6P1Q8NGX9 317 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 HDAC10Q969S8 669 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 VOPP1Q96AW1 172 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 OLFM1Q99784 485 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 Q9H521 79 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 EBF1Q9UH73 591 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 CDYLQ9Y232 598 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 ANKRD36A6QL64 1941 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 EML5Q05BV3 1969 aa14.09□□□□□ -0.15
HMGA1-203ENST00000374116 MID1O15344 667 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 SERPINF2P08697 491 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 THRAP10827 490 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 FNTBP49356 437 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 SNRPD1P62314 119 aaKnown RBP14.08□□□□□ -0.15
HMGA1-203ENST00000374116 GSTM4Q03013 218 aa14.08□□□□□ -0.15
HMGA1-203ENST00000374116 SRSF5Q13243 272 aaKnown RBP14.08□□□□□ -0.15
HMGA1-203ENST00000374116 ELAVL3Q14576 367 aaKnown RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms