RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SLC46A2Q9BY10 475 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 ZBP1Q9H171 429 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 IPPKQ9H8X2 491 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 PFDN4Q9NQP4 134 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.45■□□□□ 0.54
USP49-202ENST00000373010 TNPO3Q9Y5L0 923 aaKnown RBP18.45■□□□□ 0.54
USP49-202ENST00000373010 C7orf72A4D263 438 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 CCDC154A6NI56 674 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 ENO4A6NNW6 628 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 FGF18O76093 207 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 SERPINA4P29622 427 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 SOX11P35716 441 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 SPAM1P38567 509 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 GDF5P43026 501 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 MAPK8P45983 427 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 MRPL19P49406 292 aaKnown RBP18.45■□□□□ 0.54
USP49-202ENST00000373010 RGS4P49798 205 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 MPP7Q5T2T1 576 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 CRTC1Q6UUV9 634 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 IFNEQ86WN2 208 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 ZBTB2Q8N680 514 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 PDPRQ8NCN5 879 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 NUDT8Q8WV74 236 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 ZUFSPQ96AP4 578 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 PPWD1Q96BP3 646 aaKnown RBP18.45■□□□□ 0.54
USP49-202ENST00000373010 UHRF1Q96T88 793 aaPredicted RBP18.45■□□□□ 0.54
USP49-202ENST00000373010 SLC29A1Q99808 456 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 CIB1Q99828 191 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 CORO1BQ9BR76 489 aa18.45■□□□□ 0.54
USP49-202ENST00000373010 FAM126AQ9BYI3 521 aaPredicted RBP18.45■□□□□ 0.54
USP49-202ENST00000373010 PTBP2Q9UKA9 531 aaKnown RBP18.45■□□□□ 0.54
USP49-202ENST00000373010 EEDO75530 441 aaKnown RBP18.44■□□□□ 0.54
USP49-202ENST00000373010 CLTBP09497 229 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 CHRM1P11229 460 aaPredicted RBP18.44■□□□□ 0.54
USP49-202ENST00000373010 GRIK2Q13002 908 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 TRAF3Q13114 568 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 GPRC6AQ5T6X5 926 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 RFLNAQ6ZTI6 216 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 PROKR1Q8TCW9 393 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 TSPEARQ8WU66 669 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 EGFL8Q99944 293 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 EFHD1Q9BUP0 239 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 FAM192AQ9GZU8 254 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 CNOT11Q9UKZ1 510 aaKnown RBP18.44■□□□□ 0.54
USP49-202ENST00000373010 MAFFQ9ULX9 164 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 AURKCQ9UQB9 309 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 CCL26Q9Y258 94 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 ZNF510Q9Y2H8 683 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 OARD1Q9Y530 152 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 AP1G1O43747 822 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 GLUD1P00367 558 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 C8AP07357 584 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 SMIM18P0DKX4 95 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 DGKAP23743 735 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 FOXM1Q08050 763 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 ABRAXAS2Q15018 415 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 LIN52Q52LA3 116 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 NXPE1Q8N323 547 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 TMEM199Q8N511 208 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 PIP4K2CQ8TBX8 421 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 SLC22A17Q8WUG5 538 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 TMEM74Q96NL1 305 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 PDE4DIPQ5VU43 2346 aa18.44■□□□□ 0.54
USP49-202ENST00000373010 AKAP10O43572 662 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 HLA-FP30511 346 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 RFC2P35250 354 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 HSPA13P48723 471 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 PIK3CGP48736 1102 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 IRX1P78414 480 aaPredicted RBP18.43■□□□□ 0.54
USP49-202ENST00000373010 GRAMD4Q6IC98 578 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 MILR1Q7Z6M3 343 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 KIAA2013Q8IYS2 634 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 LMLNQ96KR4 655 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 TRIM54Q9BYV2 358 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 INTS7Q9NVH2 962 aaKnown RBP18.43■□□□□ 0.54
USP49-202ENST00000373010 HCFC1R1Q9NWW0 138 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 ZIM2Q9NZV7 527 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 SUN2Q9UH99 717 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 MYOCOSA0A1B0GUC4 107 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 FAM234BA2RU67 622 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 ARPC2O15144 300 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 CCL16O15467 120 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 PGM3O95394 542 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 CTSAP10619 480 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 MTHFD1P11586 935 aaKnown RBP18.43■□□□□ 0.54
USP49-202ENST00000373010 GSK3BP49841 420 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 MYBPC1Q00872 1141 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 CREB5Q02930 508 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 BNIP2Q12982 314 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 NR6A1Q15406 480 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 AAK1Q2M2I8 961 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 MYLK3Q32MK0 819 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 PLA2G4EQ3MJ16 856 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 LRRC73Q5JTD7 316 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 LRRC66Q68CR7 880 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 ASTLQ6HA08 431 aaPredicted RBP18.43■□□□□ 0.54
USP49-202ENST00000373010 MACC1Q6ZN28 852 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 CCT7Q99832 543 aa18.43■□□□□ 0.54
USP49-202ENST00000373010 TMEM79Q9BSE2 394 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms