RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 C1QTNF3Q9BXJ4 246 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 SMPD4Q9NXE4 827 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 SEPT3Q9UH03 358 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 GIT1Q9Y2X7 761 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 CCL15-CCL14A0A0B4J2E2 113 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 E2F3O00716 465 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 TOR1BO14657 336 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 TBC1D4O60343 1298 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 INMTO95050 263 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 TSPAN12O95859 305 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 HPRP00739 348 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 ZNF140P52738 457 aaPredicted RBP16.17■□□□□ 0.18
SDC4-201ENST00000372733 SERINC3Q13530 473 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 CCL15Q16663 113 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 C18orf21Q32NC0 220 aaPredicted RBP16.17■□□□□ 0.18
SDC4-201ENST00000372733 CYP20A1Q6UW02 462 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 SPESP1Q6UW49 350 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 DNAJC14Q6Y2X3 702 aaPredicted RBP16.17■□□□□ 0.18
SDC4-201ENST00000372733 OR4K2Q8NGD2 314 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 PEX13Q92968 403 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 MUL1Q969V5 352 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 PAK1IP1Q9NWT1 392 aaPredicted RBP16.17■□□□□ 0.18
SDC4-201ENST00000372733 BAG5Q9UL15 447 aa16.17■□□□□ 0.18
SDC4-201ENST00000372733 KRBA1A5PL33 1030 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 M0QZ92 97 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 KLK8O60259 260 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 OR1I1O60431 355 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 NR6A1Q15406 480 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 MAPRE1Q15691 268 aaKnown RBP16.16■□□□□ 0.18
SDC4-201ENST00000372733 DDR2Q16832 855 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 SLC39A12Q504Y0 691 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 TTC23Q5W5X9 447 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 TTC16Q8NEE8 873 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 LINGO1Q96FE5 620 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 AURKBQ96GD4 344 aaPredicted RBP16.16■□□□□ 0.18
SDC4-201ENST00000372733 SH3YL1Q96HL8 342 aaPredicted RBP16.16■□□□□ 0.18
SDC4-201ENST00000372733 ZNF583Q96ND8 569 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 RPRD1AQ96P16 312 aaPredicted RBP16.16■□□□□ 0.18
SDC4-201ENST00000372733 ALPK1Q96QP1 1244 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 HEBP1Q9NRV9 189 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 FLRT1Q9NZU1 646 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 VAPAQ9P0L0 249 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 LIMD1Q9UGP4 676 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 ENPP5Q9UJA9 477 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 ST14Q9Y5Y6 855 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 CPQQ9Y646 472 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 C16orf96A6NNT2 1141 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 M0QZQ0 153 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 CST1P01037 141 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 NPPAP01160 153 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 CAPN1P07384 714 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 GP2P55259 537 aaKnown RBP16.16■□□□□ 0.18
SDC4-201ENST00000372733 PPP2R2BQ00005 443 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 IL27RAQ6UWB1 636 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 GPSM1Q86YR5 675 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 PARP8Q8N3A8 854 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 EEF1AKMT1Q8WVE0 214 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 ABHD8Q96I13 439 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 ZNF347Q96SE7 839 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 OSBPL10Q9BXB5 764 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 IKZF5Q9H5V7 419 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 TRPV2Q9Y5S1 764 aa16.16■□□□□ 0.18
SDC4-201ENST00000372733 CLDN25C9JDP6 229 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 PTGES3LE9PB15 166 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 GSTA4O15217 222 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 PBX3P40426 434 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 TXNDC11Q6PKC3 985 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 PIANPQ8IYJ0 282 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 ZNF555Q8NEP9 628 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 OR2T12Q8NG77 320 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 GPR152Q8TDT2 470 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 BRI3BPQ8WY22 251 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 NSMCE3Q96MG7 304 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 ZNF382Q96SR6 550 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 CCDC90BQ9GZT6 254 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 SARS2Q9NP81 518 aaKnown RBP16.15■□□□□ 0.18
SDC4-201ENST00000372733 NLE1Q9NVX2 485 aaPredicted RBP16.15■□□□□ 0.18
SDC4-201ENST00000372733 DNAJB9Q9UBS3 223 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 WDR37Q9Y2I8 494 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 IGLV3-10A0A075B6K4 115 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 FAM92AA1XBS5 289 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 TMEM247A6NEH6 219 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 GMNNO75496 209 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 NDST3O95803 873 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 CNPP09543 421 aaKnown RBP16.15■□□□□ 0.18
SDC4-201ENST00000372733 PRKACGP22612 351 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 HPCAL1P37235 193 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 CPT1AP50416 773 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 OXCT1P55809 520 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 PWP1Q13610 501 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 AFTPHQ6ULP2 937 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 NKAPQ8N5F7 415 aaKnown RBP16.15■□□□□ 0.18
SDC4-201ENST00000372733 KLHDC9Q8NEP7 349 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 OR10A6Q8NH74 314 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 METTL6Q8TCB7 284 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 SLC47A1Q96FL8 570 aa16.15■□□□□ 0.18
SDC4-201ENST00000372733 EXOC2Q96KP1 924 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms