RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF222Q9UK12 451 aa13.19□□□□□ -0.3
RAPGEF1-201ENST00000372189 DPPA5A6NC42 116 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 CCR4P51679 360 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 GCNT7Q6ZNI0 430 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 LRRC4CQ9HCJ2 640 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 PLLPQ9Y342 182 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 LYNP07948 512 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 VITQ6UXI7 678 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 UBE2R2Q712K3 238 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR4K2Q8NGD2 314 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 ALG3Q92685 438 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 GBA3Q9H227 469 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 ARFGEF2Q9Y6D5 1785 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 LRCH4O75427 683 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR6B1O95007 311 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 OTCP00480 354 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 VIPP01282 170 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 ASLP04424 464 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 VEGFBP49765 207 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 GALK1P51570 392 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 CACNG1Q06432 222 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC47A1Q96FL8 570 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 C7orf26Q96N11 449 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 DNAAF2Q9NVR5 837 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 FZD10Q9ULW2 581 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 PCDHB1Q9Y5F3 818 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 FFAR3O14843 346 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 GPR42O15529 346 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 LRIG2O94898 1065 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 VNN1O95497 513 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 CXCR3P49682 368 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 DEF8Q6ZN54 512 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 SAMD14Q8IZD0 417 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 PDPRQ8NCN5 879 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 COPS4Q9BT78 406 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 ABCB8Q9NUT2 735 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 CDH22Q9UJ99 828 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 COLEC10Q9Y6Z7 277 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 INSIG1O15503 277 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 AVILO75366 819 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 HNF4AP41235 474 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 PSMD4P55036 377 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 DSC2Q02487 901 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 CBFBQ13951 182 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 AP5B1Q2VPB7 878 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLCO6A1Q86UG4 719 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC44A1Q8WWI5 657 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 TRIB2Q92519 343 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 AP2M1Q96CW1 435 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 IRF2BPLQ9H1B7 796 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
RAPGEF1-201ENST00000372189 G3V2T6 193 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 HAT1O14929 419 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 MGRN1O60291 552 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 ULK1O75385 1050 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 PRKAR1AP10644 381 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 GJA1P17302 382 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 GDI1P31150 447 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 NRIP1P48552 1158 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 BORAQ6PGQ7 559 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 GPRIN3Q6ZVF9 776 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TRPV1Q8NER1 839 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 EXO5Q9H790 373 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 KCTD5Q9NXV2 234 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 FAM92AA1XBS5 289 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 AZIN1O14977 448 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 MATN3O15232 486 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TRMUO75648 421 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TGFBR2P37173 567 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 RPL3P39023 403 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 SMIM11AP58511 58 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 USP4Q13107 963 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 KLF10Q13118 480 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 RNF151Q2KHN1 245 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CYP4V2Q6ZWL3 525 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 COX4I2Q96KJ9 171 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 ANGPT4Q9Y264 503 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 TLR6Q9Y2C9 796 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 VWA7Q9Y334 891 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 H0Y858 1186 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 FGF18O76093 207 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CDK14O94921 469 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 CCNHP51946 323 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC7A2P52569 658 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 PRKAG1P54619 331 aa13.17□□□□□ -0.3
RAPGEF1-201ENST00000372189 NPY5RQ15761 445 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms