RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 BHMTQ93088 406 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TBL1YQ9BQ87 522 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TKTL2Q9H0I9 626 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 SIK2Q9H0K1 926 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 ANLNQ9NQW6 1124 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 SMPD3Q9NY59 655 aaPredicted RBP11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TBC1D14Q9P2M4 693 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF639Q9UID6 485 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 CDC14AQ9UNH5 594 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TCAF1Q9Y4C2 921 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 TRAF6Q9Y4K3 522 aa11.33□□□□□ -0.6
TSPAN1-201ENST00000372003 RNF103-CHMP3A0A140T963 221 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 OTOL1A6NHN0 477 aaPredicted RBP11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 A8MT66 165 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 TMEM233B4DJY2 109 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 ACOX3O15254 700 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 ACSL4O60488 711 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 VPS4BO75351 444 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 SULT1C4O75897 302 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 ZBTB11O95625 1053 aaPredicted RBP11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 SRFP11831 508 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 CCNA2P20248 432 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 CCNCP24863 283 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 GEMP55040 296 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 PMS2P3Q13401 168 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 OLIG2Q13516 323 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 RUNX3Q13761 415 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 PDGFRLQ15198 375 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 AARS2Q5JTZ9 985 aaKnown RBP11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF773Q6PK81 442 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 ADGRG5Q8IZF4 528 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 CLYBLQ8N0X4 340 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 OR13F1Q8NGS4 319 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 RAB2BQ8WUD1 216 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 ELMO2Q96JJ3 720 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 UNKQ9C0B0 810 aaKnown RBP11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 POLR1BQ9H9Y6 1135 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 TREX1Q9NSU2 369 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 DUSP12Q9UNI6 340 aa11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 TCF20Q9UGU0 1960 aaKnown RBP11.32□□□□□ -0.6
TSPAN1-201ENST00000372003 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NME4O00746 187 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 PAGE1O75459 146 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC34A2O95436 690 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NFATC1O95644 943 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 EIF2S1P05198 315 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 UGT1A6P19224 532 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SAT1P21673 171 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 UGT1A1P22309 533 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 UGT1A4P22310 534 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 HTR7P34969 479 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 UGT1A3P35503 534 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 UGT1A5P35504 534 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SOX9P48436 509 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 TAS2R39P59534 338 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ADARB1P78563 741 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NFATC3Q12968 1075 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 DHCR24Q15392 516 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SMAD1Q15797 465 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 IER5LQ5T953 404 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NADSYN1Q6IA69 706 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 C16orf87Q6PH81 154 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 PTAR1Q7Z6K3 402 aaPredicted RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC15A3Q8IY34 581 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 TTC30BQ8N4P2 665 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 MOCOSQ96EN8 888 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 BTN2A3PQ96KV6 586 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 RDH12Q96NR8 316 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 GSTO2Q9H4Y5 243 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SPHK2Q9NRA0 654 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 HEBP1Q9NRV9 189 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 RIC8BQ9NVN3 520 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 FBXO5Q9UKT4 447 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ERGIC3Q9Y282 383 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 TDRKHQ9Y2W6 561 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 TMED5Q9Y3A6 229 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 HEMK1Q9Y5R4 338 aaPredicted RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SNX10Q9Y5X0 201 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 I6L893 689 aaPredicted RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ARNTLO00327 626 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 KPNA4O00629 521 aaPredicted RBP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 ANGPT2O15123 496 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 SEC14L2O76054 403 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 NPPAP01160 153 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 GFAPP14136 432 aa11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 HNRNPLP14866 589 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSPAN1-201ENST00000372003 TPH1P17752 444 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms