RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TSR3Q9UJK0 312 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 DUSP12Q9UNI6 340 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 RAD51BO15315 384 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 NUAK1O60285 661 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 ACADMP11310 421 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 CD72P21854 359 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 MPSTP25325 297 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 CCR10P46092 362 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 BOP1Q14137 746 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 UNC50Q53HI1 259 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 CCM2Q9BSQ5 444 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 NDRG2Q9UN36 371 aaKnown RBP25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 OARD1Q9Y530 152 aa25.86■■□□□ 1.73
ATPAF1-202ENST00000371937 PRUNE2Q8WUY3 3088 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 VEGFDO43915 354 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 S100BP04271 92 aaPredicted RBP25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 IL9P15248 144 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 CTSCP53634 463 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 GTF2H3Q13889 308 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 SEL1L3Q68CR1 1132 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 TMEM220Q6QAJ8 160 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 FITM2Q8N6M3 262 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 MRGPRX1Q96LB2 322 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 DNAJC28Q9NX36 388 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 HEY2Q9UBP5 337 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 VTI1BQ9UEU0 232 aa25.85■■□□□ 1.73
ATPAF1-202ENST00000371937 NCF1BA6NI72 391 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 NCF1CA8MVU1 366 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 MPC1LP0DKB6 136 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 NCF1P14598 390 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 HK3P52790 923 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 ADPRHP54922 357 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 SGCGQ13326 291 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 PPP1R3AQ16821 1122 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 WSCD2Q2TBF2 565 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 BCL7AQ4VC05 210 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 NEK10Q6ZWH5 1172 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 ADGRG6Q86SQ4 1221 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 BEND7Q8N7W2 519 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 C1QTNF3Q9BXJ4 246 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 OR2AG1Q9H205 316 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 PREBQ9HCU5 417 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 UTP6Q9NYH9 597 aaKnown RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 ZDHHC2Q9UIJ5 367 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 ZFR2Q9UPR6 939 aaKnown RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 TRPM6Q9BX84 2022 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 MATN2O00339 956 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 SIX3O95343 332 aaPredicted RBP25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 MAP7D1Q3KQU3 841 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 ANKS6Q68DC2 871 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 NEK5Q6P3R8 708 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 TMEM92Q6UXU6 159 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 AFAP1L2Q8N4X5 818 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 PLA2G15Q8NCC3 412 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 AGR3Q8TD06 166 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 C1QTNF7Q9BXJ2 289 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 C1QTNF2Q9BXJ5 285 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 RDH14Q9HBH5 336 aa25.84■■□□□ 1.73
ATPAF1-202ENST00000371937 HDAC3O15379 428 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 FFAR2O15552 330 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 GPC4O75487 556 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 PCCBP05166 539 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 TEAD1P28347 426 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 EEF1DP29692 281 aaKnown RBP25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 TRIM74Q86UV6 250 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 COX14Q96I36 57 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 RILPQ96NA2 401 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 LENG8Q96PV6 779 aaPredicted RBP25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 SHCBP1LQ9BZQ2 653 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 ADAMTS6Q9UKP5 1117 aa25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 APOBEC2Q9Y235 224 aaKnown RBP25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 TNPO3Q9Y5L0 923 aaKnown RBP25.83■■□□□ 1.73
ATPAF1-202ENST00000371937 ZNF195O14628 629 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 SLCO2B1O94956 709 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 C8GP07360 202 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 GSTM1P09488 218 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 VCLP18206 1134 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 GSTM4Q03013 218 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 SYTL3Q4VX76 610 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 TMEM259Q4ZIN3 620 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 SH2D4BQ5SQS7 431 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 MTDHQ86UE4 582 aaKnown RBP25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 CUZD1Q86UP6 607 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 PDPRQ8NCN5 879 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 FAR2Q96K12 515 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 COG4Q9H9E3 785 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 ATXN10Q9UBB4 475 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 GPR34Q9UPC5 381 aa25.82■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3DA0A087WVF3 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3IA0A087WXS9 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3EA0A087X179 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3KA0A087X1G2 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 A0A1W2PQU0 124 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3FA6NER0 549 aaPredicted RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3LB9A6J9 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 HGSO14964 777 aaPredicted RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 RNGTTO60942 597 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 PAK4O96013 591 aaPredicted RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 RPS17P08708 135 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 ENO2P09104 434 aaPredicted RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms