RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SLC44A1Q8WWI5 657 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 SPACA7Q96KW9 195 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 ERVK-19Q9WJR5 959 aa15.11■□□□□ 0.01
COL5A1-201ENST00000371817 PAPSS1O43252 624 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 NDST1P52848 882 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SGCGQ13326 291 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 KLHL36Q8N4N3 616 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CYTH4Q9UIA0 394 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 F8VP50 259 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 POLR1CO15160 346 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ALOX15BO15296 676 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ABRQ12979 859 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CLCA4Q14CN2 919 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 LRRC38Q5VT99 294 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 GTF2IRD2BQ6EKJ0 949 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 GTF2IRD2Q86UP8 949 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 UBR7Q8N806 425 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ANKFN1Q8N957 763 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SPATA22Q8NHS9 363 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ASB8Q9H765 288 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF490Q9ULM2 529 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ARL5AQ9Y689 179 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ERBB3P21860 1342 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 QSOX1O00391 747 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CHRNA5P30532 468 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ANTXR2P58335 489 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 VLDLRP98155 873 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 FGL1Q08830 312 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SYNE4Q8N205 404 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 RHOJQ9H4E5 214 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 C3orf14Q9HBI5 128 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 TFPTP0C1Z6 253 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 FBXO47Q5MNV8 452 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SLC7A6OSQ96CW6 309 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 IFT27Q9BW83 186 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 UNKLQ9H9P5 680 aaKnown RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SH3PXD2BA1X283 911 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CYP1A2P05177 515 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 THP07101 528 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ACADMP11310 421 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SEMA5AQ13591 1074 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 TLR1Q15399 786 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 PACRGLQ8N7B6 248 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 TBC1D15Q8TC07 691 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CLP1Q92989 425 aaKnown RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 LINGO1Q96FE5 620 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 EXOC2Q96KP1 924 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CIPCQ9C0C6 399 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 LYARQ9NX58 379 aaKnown RBP15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 EI24O14681 340 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 IGFALSP35858 605 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 CREB5Q02930 508 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SCARF1Q14162 830 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 FAM189A2Q15884 450 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF311Q5JNZ3 666 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 MFSD2AQ8NA29 543 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 RHBGQ9H310 441 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 MAPK9P45984 424 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 PON3Q15166 354 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 HLFQ16534 295 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 GPR153Q6NV75 609 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 SMARCD3Q6STE5 483 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF767PQ75MW2 155 aa15.1■□□□□ 0.01
COL5A1-201ENST00000371817 BOLA2-SMG1P6H3BVE0 249 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ICAM3P32942 547 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 CRYBG2Q8N1P7 616 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 POC1BQ8TC44 478 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 TWIST2Q8WVJ9 160 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 CLIP3Q96DZ5 547 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 TKTL2Q9H0I9 626 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SPIN1Q9Y657 262 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 OXSR1O95747 527 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 RYKP34925 604 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 GNPDA1P46926 289 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 TGFBIQ15582 683 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF529Q6P280 563 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SYVN1Q86TM6 617 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 MAGEA11P43364 429 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 GBX2P52951 348 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 RGS8P57771 180 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF557Q8N988 423 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 AHCYL2Q96HN2 611 aaKnown RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 UGT8Q16880 541 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SLC44A3Q8N4M1 653 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 CIDECQ96AQ7 238 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ABCG8Q9H221 673 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SLA2Q9H6Q3 261 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 RIMKLBQ9ULI2 386 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 MED31Q9Y3C7 131 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 M0R129 80 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 IL32P24001 234 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 CDH15P55291 814 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 RALGPS1Q5JS13 557 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 XKR5Q6UX68 686 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms