RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 MYRFLQ96LU7 910 aa11.58□□□□□ -0.56
PDE6C-201ENST00000371447 TCF12Q99081 682 aa11.58□□□□□ -0.56
PDE6C-201ENST00000371447 TMEM79Q9BSE2 394 aa11.58□□□□□ -0.56
PDE6C-201ENST00000371447 THUMPD3Q9BV44 507 aaKnown RBP11.58□□□□□ -0.56
PDE6C-201ENST00000371447 SPATA16Q9BXB7 569 aa11.58□□□□□ -0.56
PDE6C-201ENST00000371447 CERS4Q9HA82 394 aa11.58□□□□□ -0.56
PDE6C-201ENST00000371447 ELOVL2Q9NXB9 296 aa11.58□□□□□ -0.56
PDE6C-201ENST00000371447 CNOT6Q9ULM6 557 aaKnown RBP11.58□□□□□ -0.56
PDE6C-201ENST00000371447 SEC22BO75396 215 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 IGSF6O95976 241 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 TRBC1P01850 177 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 DNAJB1P25685 340 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 SERPINA4P29622 427 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 POLR2JP52435 117 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 INHBCP55103 352 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 WDR5P61964 334 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 TEAD2Q15562 447 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 SF1Q15637 639 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 PABPC1LQ4VXU2 614 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 OGFRL1Q5TC84 451 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 SFRP1Q8N474 314 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CYGBQ8WWM9 190 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 KCNJ9Q92806 393 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 FATE1Q969F0 183 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 KCTD14Q9BQ13 255 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 PFDN4Q9NQP4 134 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 TRAV19A0A0A6YYK7 116 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 C7orf72A4D263 438 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 SLC6A2P23975 617 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 SLC26A3P40879 764 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 RGS4P49798 205 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CHN2P52757 468 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CDH15P55291 814 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ERVFC1P60507 584 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 LIPEQ05469 1076 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 LRRC26Q2I0M4 334 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 KLHDC10Q6PID8 442 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 Q6ZSR9 355 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ITIH5Q86UX2 942 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 KRTCAP2Q8N6L1 136 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 DCAF4L2Q8NA75 395 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 SLCO4A1Q96BD0 722 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 VPS50Q96JG6 964 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ACTR8Q9H981 624 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 LZTS1Q9Y250 596 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 VPS9D1Q9Y2B5 631 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 LOC730098B7Z3J9 87 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 RAD51BO15315 384 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 RPS17P08708 135 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 HSPA1AP0DMV8 641 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 HSPA1BP0DMV9 641 aaKnown RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 UROSP10746 265 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 IDO1P14902 403 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ADSLP30566 484 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 MTA1Q13330 715 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CRY1Q16526 586 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ZIK1Q3SY52 487 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ASTLQ6HA08 431 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CRTC1Q6UUV9 634 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CBR4Q8N4T8 237 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 VWCEQ96DN2 955 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 AURKBQ96GD4 344 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 RNF145Q96MT1 663 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 ASAH2Q9NR71 780 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 CXXC1Q9P0U4 656 aaPredicted RBP11.57□□□□□ -0.56
PDE6C-201ENST00000371447 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 DHRS7Q9Y394 339 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 OR51B4Q9Y5P0 310 aa11.57□□□□□ -0.56
PDE6C-201ENST00000371447 VCANP13611 3396 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 CHD9Q3L8U1 2897 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 TRIM43BA6NCK2 446 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 PLOD2O00469 737 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 RSL1D1O76021 490 aaKnown RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 MLYCDO95822 493 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 CLTBP09497 229 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 SRCP12931 536 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 SUOXP51687 545 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 RHDQ02161 417 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ABRQ12979 859 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 C5orf22Q49AR2 442 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ZFP1Q6P2D0 407 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 DDX53Q86TM3 631 aaKnown RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 OFCC1Q8IZS5 231 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 RBFAQ8N0V3 343 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 OR2AP1Q8NGE2 309 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 FIG4Q92562 907 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 TRIM43Q96BQ3 446 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ALG14Q96F25 216 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 TSSK3Q96PN8 268 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 FAM126AQ9BYI3 521 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 DHRS12A0PJE2 317 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 XPAP23025 273 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 RECQLP46063 649 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 NFKB2Q00653 900 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 SELPLGQ14242 412 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 INO80DQ53TQ3 878 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ALG1LQ6GMV1 187 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms