RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 DSELQ8IZU8 1212 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 OR2AP1Q8NGE2 309 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.39
GPC3-201ENST00000370818 BADQ92934 168 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 BORCS5Q969J3 196 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 RCN3Q96D15 328 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 ATP13A3Q9H7F0 1226 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 IL26Q9NPH9 171 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 TLR9Q9NR96 1032 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.39
GPC3-201ENST00000370818 ATP6AP2A0A1C7CYW4 349 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 ATP6AP2O75787 350 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 PRAMEF1O95521 474 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 IGSF6O95976 241 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 HSPA1AP0DMV8 641 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 HSPA1BP0DMV9 641 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 EEF1DP29692 281 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 HK3P52790 923 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 LARP4Q71RC2 724 aaKnown RBP eCLIP12.64□□□□□ -0.391e-323■■□□□ 12.5
GPC3-201ENST00000370818 RAB44Q7Z6P3 723 aaPredicted RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 METTL3Q86U44 580 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 CLYBLQ8N0X4 340 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 STK40Q8N2I9 435 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 FBXO39Q8N4B4 442 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 KYQ8NBH2 561 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 DDHD1Q8NEL9 900 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 TRPC4APQ8TEL6 797 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 LINGO1Q96FE5 620 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 MID1IP1Q9NPA3 183 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 TRNAU1APQ9NX07 287 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 EBF1Q9UH73 591 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 COMMD10Q9Y6G5 202 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 PRMT5O14744 637 aaPredicted RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 CYBBP04839 570 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 BPIP17213 487 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 HMOX2P30519 316 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 BMPR1AP36894 532 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 IL2P60568 153 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 CTBSQ01459 385 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 KCNC4Q03721 635 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 OGFOD2Q6N063 350 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 C19orf60Q96EN9 201 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 ASB2Q96Q27 587 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 BOCQ9BWV1 1114 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 SARS2Q9NP81 518 aaKnown RBP12.64□□□□□ -0.39
GPC3-201ENST00000370818 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
GPC3-201ENST00000370818 NCF1BA6NI72 391 aaPredicted RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 NCF1CA8MVU1 366 aaPredicted RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 A8MX80 341 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 E5RI56 91 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 UBDO15205 165 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 H6PDO95479 791 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 RPS17P08708 135 aaKnown RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 NCF1P14598 390 aaPredicted RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 PSMC3P17980 439 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CDH3P22223 829 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CTNNB1P35222 781 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 HSPA13P48723 471 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 EIF2B2P49770 351 aaKnown RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 AGTR2P50052 363 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 C21orf59P57076 290 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CLCQ05315 142 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CD300CQ08708 224 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 NFATC2Q13469 925 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 NIPAL1Q6NVV3 410 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CERS6Q6ZMG9 384 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 TSPAN33Q86UF1 283 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 GPR180Q86V85 440 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 SERPINA9Q86WD7 417 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CHPT1Q8WUD6 406 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 POF1BQ8WVV4 589 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 KCNA7Q96RP8 456 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 RAD9AQ99638 391 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CGREF1Q99674 301 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 C19orf43Q9BQ61 176 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 COPS7BQ9H9Q2 264 aaPredicted RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 PACSIN3Q9UKS6 424 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 GBF1Q92538 1859 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CDH23Q9H251 3354 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 CXorf51AA0A1B0GTR3 108 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 NPIPB15A6NHN6 443 aaPredicted RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 SYCE1LA8MT33 242 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 STAMBPO95630 424 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 SERPINA4P29622 427 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 LCP2Q13094 533 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.393e-23■□□□□ 9
GPC3-201ENST00000370818 PTK2BQ14289 1009 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
GPC3-201ENST00000370818 GK5Q6ZS86 529 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 SLC7A5P1Q8MH63 180 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 ECHDC3Q96DC8 303 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 LYSMD1Q96S90 227 aa12.63□□□□□ -0.39
GPC3-201ENST00000370818 DCUN1D5Q9BTE7 237 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms