RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CCDC3Q9BQI4 270 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 KCTD5Q9NXV2 234 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 RAI2Q9Y5P3 530 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 TLR5O60602 858 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SNX4O95219 450 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 TFPTP0C1Z6 253 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 LMO2P25791 158 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 CXCR3P49682 368 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 GSK3BP49841 420 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 TAS2R41P59536 307 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 CACNG1Q06432 222 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 GLB1L3Q8NCI6 653 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF420Q8TAQ5 688 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 COL26A1Q96A83 441 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 C11orf24Q96F05 449 aaPredicted RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 HMCESQ96FZ2 354 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 SLC9A7Q96T83 725 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 TFB2MQ9H5Q4 396 aaKnown RBP15.74■□□□□ 0.11
COL17A1-202ENST00000369733 GIT1Q9Y2X7 761 aa15.74■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF541Q9H0D2 1346 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 MYCLP1P12525 358 aaPredicted RBP15.73■□□□□ 0.11
COL17A1-202ENST00000369733 SLC10A6Q3KNW5 377 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 SLC39A4Q6P5W5 647 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF773Q6PK81 442 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 OR9I1Q8NGQ6 314 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 LPIN3Q9BQK8 851 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 DCSTAMPQ9H295 470 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 ST3GAL5Q9UNP4 418 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 POU2F1P14859 743 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 CHRNA4P43681 627 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 CCR10P46092 362 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 TGFBIQ15582 683 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 SYT16Q17RD7 645 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 SOWAHAQ2M3V2 549 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 RASSF6Q6ZTQ3 369 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 ZC3HC1Q86WB0 502 aaKnown RBP15.73■□□□□ 0.11
COL17A1-202ENST00000369733 MEIOBQ8N635 442 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 SIGLEC10Q96LC7 697 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 CHD2O14647 1828 aaKnown RBP15.73■□□□□ 0.11
COL17A1-202ENST00000369733 A0A1W2PQ72 361 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 FABP12A6NFH5 140 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 OR5F1O95221 314 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 ASMTP46597 345 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 MANFP55145 182 aaKnown RBP15.73■□□□□ 0.11
COL17A1-202ENST00000369733 FAM220AQ7Z4H9 259 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 CPNE9Q8IYJ1 553 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 TMEM209Q96SK2 561 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 SNTG1Q9NSN8 517 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 CLEC4AQ9UMR7 237 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 QSOX1O00391 747 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 CHST10O43529 356 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 DYRK3O43781 588 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 PIGRP01833 764 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 IFNW1P05000 195 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 DAOAP59103 153 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 FOXM1Q08050 763 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 OR6K2Q8NGY2 324 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 ZFYVE1Q9HBF4 777 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 INTS7Q9NVH2 962 aaKnown RBP15.73■□□□□ 0.11
COL17A1-202ENST00000369733 GMIPQ9P107 970 aa15.73■□□□□ 0.11
COL17A1-202ENST00000369733 MAGEB17A8MXT2 336 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 PRKD3O94806 890 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 CCNB2O95067 398 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 SIX3O95343 332 aaPredicted RBP15.72■□□□□ 0.11
COL17A1-202ENST00000369733 PAX3P23760 479 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 BCAP31P51572 246 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 DNASE1L3Q13609 305 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 LAPTM4BQ86VI4 370 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 PPTC7Q8NI37 304 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 MAP4K5Q9Y4K4 846 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 OGNP20774 298 aaKnown RBP15.72■□□□□ 0.11
COL17A1-202ENST00000369733 HSF2Q03933 536 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 SULT1C3Q6IMI6 304 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.72■□□□□ 0.11
COL17A1-202ENST00000369733 FCRL5Q96RD9 977 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 C11orf16Q9NQ32 467 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 SEMA3GQ9NS98 782 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 CARD8Q9Y2G2 431 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 AKAP12Q02952 1782 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 GLYATL1P3A0A0U1RQE8 302 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 GABRDO14764 452 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 IRF6O14896 467 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 IL7RP16871 459 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 ZNF182P17025 639 aaPredicted RBP15.72■□□□□ 0.11
COL17A1-202ENST00000369733 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 TWNKQ96RR1 684 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 PFDN2Q9UHV9 154 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 CLIC3O95833 236 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 PRPS2P11908 318 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 CDHR3Q6ZTQ4 885 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 NAT16Q8N8M0 369 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 HJURPQ8NCD3 748 aaPredicted RBP15.72■□□□□ 0.11
COL17A1-202ENST00000369733 RASSF5Q8WWW0 418 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 SNX27Q96L92 541 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 GPR22Q99680 433 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 TOR3AQ9H497 397 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 C1orf109Q9NX04 203 aa15.72■□□□□ 0.11
COL17A1-202ENST00000369733 ORC5O43913 435 aa15.71■□□□□ 0.11
COL17A1-202ENST00000369733 ABCB7O75027 752 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms