RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 SCN3BQ9NY72 215 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.69■□□□□ 0.26
DKC1-201ENST00000369550 ZIM2Q9NZV7 527 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 CSADQ9Y600 493 aa16.69■□□□□ 0.26
DKC1-201ENST00000369550 NOTOA8MTQ0 251 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 EFCAB9A8MZ26 197 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 GOT2P00505 430 aaKnown RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 CYP11A1P05108 521 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 PRR35P0CG20 571 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 CYP4B1P13584 511 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ZNF37AP17032 561 aaPredicted RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 ARL1P40616 181 aaPredicted RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 PNPLA4P41247 253 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 CXCR3P49682 368 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 RBBP7Q16576 425 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 UBE2UQ5VVX9 321 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 PM20D1Q6GTS8 502 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 DLEU7Q6UYE1 221 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 NECAB2Q7Z6G3 386 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ZFAND4Q86XD8 727 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ARHGAP12Q8IWW6 846 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ADHFE1Q8IWW8 467 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 FAM162AQ96A26 154 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 PGAP3Q96FM1 320 aaPredicted RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 GAD1Q99259 594 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 THUMPD3Q9BV44 507 aaKnown RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 SPATC1LQ9H0A9 340 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 RNF38Q9H0F5 515 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 MARCH7Q9H992 704 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ADARB2Q9NS39 739 aaKnown RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 PCDHGA3Q9Y5H0 932 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 MYLKQ15746 1914 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 SBF1O95248 1867 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 SLC7A4O43246 635 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 SPNP16150 400 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 FDXRP22570 491 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 TRAF3Q13114 568 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 SV2CQ496J9 727 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ARMCX6Q7L4S7 300 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 HEATR4Q86WZ0 1026 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 MICU2Q8IYU8 434 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 AADATQ8N5Z0 425 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 DCBLD1Q8N8Z6 715 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ZNF540Q8NDQ6 660 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 OR2T11Q8NH01 316 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ATL1Q8WXF7 558 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ZNF599Q96NL3 588 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 ATOH8Q96SQ7 321 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 EPS8L2Q9H6S3 715 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 KAT8Q9H7Z6 458 aaKnown RBP16.68■□□□□ 0.26
DKC1-201ENST00000369550 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 IL37Q9NZH6 218 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 TBC1D14Q9P2M4 693 aa16.68■□□□□ 0.26
DKC1-201ENST00000369550 SOCS7O14512 581 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 PRKD3O94806 890 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 DDNO94850 711 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 CD36P16671 472 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SIM2Q14190 667 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 ZNF404Q494X3 552 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 GJC2Q5T442 439 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 SYT6Q5T7P8 510 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 B3GNT8Q7Z7M8 397 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SAPCD2Q86UD0 394 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 RHEBL1Q8TAI7 183 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 NCLNQ969V3 563 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 ZNF566Q969W8 418 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 CLSTN3Q9BQT9 956 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 DCSTAMPQ9H295 470 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 ITM2CQ9NQX7 267 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 OTOFQ9HC10 1997 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SMIM28A0A1B0GU29 152 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 PARNO95453 639 aaKnown RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 PTTG1O95997 202 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 LGALS2P05162 132 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 UROSP10746 265 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SLC2A3P11169 496 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 CD6P30203 668 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 HOXA11P31270 313 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 CA8P35219 290 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 DCTP40126 519 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 DGKQP52824 942 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 IL18R1Q13478 541 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 LRRC8DQ7L1W4 858 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 PRSS48Q7RTY5 328 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 TMEM179BQ7Z7N9 219 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SYVN1Q86TM6 617 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SYTL1Q8IYJ3 562 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 DPP10Q8N608 796 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 SETD9Q8NE22 299 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 FAM83FQ8NEG4 500 aaPredicted RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 OR10A6Q8NH74 314 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 OR5K1Q8NHB7 308 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 NUDT8Q8WV74 236 aa16.67■□□□□ 0.26
DKC1-201ENST00000369550 REXO5Q96IC2 774 aaKnown RBP16.67■□□□□ 0.26
DKC1-201ENST00000369550 ZNF583Q96ND8 569 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms