RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 DMTF1Q9Y222 760 aa17.97■□□□□ 0.47
SNX27-202ENST00000368841 SMIM28A0A1B0GU29 152 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 EIF1AXP47813 144 aaKnown RBP17.96■□□□□ 0.47
SNX27-202ENST00000368841 SULT2A1Q06520 285 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 DLG1Q12959 904 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 DCST1Q5T197 706 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 C12orf66Q96MD2 445 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 UGT2B11O75310 529 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 IPO13O94829 963 aaKnown RBP17.96■□□□□ 0.47
SNX27-202ENST00000368841 CASP7P55210 303 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 IDNKQ5T6J7 187 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 TMPRSS11AQ6ZMR5 421 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 PDZD7Q9H5P4 517 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 FKBPLQ9UIM3 349 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 RIIAD1A6NNX1 92 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 DHX15O43143 795 aaKnown RBP17.96■□□□□ 0.47
SNX27-202ENST00000368841 PKMP14618 531 aaKnown RBP17.96■□□□□ 0.47
SNX27-202ENST00000368841 CHRNA4P43681 627 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 NDUFA9Q16795 377 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 KLHL35Q6PF15 583 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 DGLUCYQ7Z3D6 616 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 PIWIL4Q7Z3Z4 852 aaKnown RBP17.96■□□□□ 0.47
SNX27-202ENST00000368841 OR10A6Q8NH74 314 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 SPATA9Q9BWV2 254 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 RAPGEFL1Q9UHV5 662 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 SELPP16109 830 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 SH3PXD2AQ5TCZ1 1133 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 PPP2R2DQ66LE6 453 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 TCEAL6Q6IPX3 200 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 CROCCP3Q8IVE0 287 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 TOR1BO14657 336 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 SP2Q02086 613 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 ODF4Q2M2E3 257 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 ZNF627Q7L945 461 aa17.96■□□□□ 0.47
SNX27-202ENST00000368841 CCDC177Q9NQR7 707 aaPredicted RBP17.96■□□□□ 0.47
SNX27-202ENST00000368841 SLC35F4A4IF30 521 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 GJA1P17302 382 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CLEC12AQ5QGZ9 265 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.461e-7■■■■□ 25.4
SNX27-202ENST00000368841 PIWIL1Q96J94 861 aaKnown RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 TRNAU1APQ9NX07 287 aaKnown RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 PLAGL1Q9UM63 463 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 MFHAS1Q9Y4C4 1052 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CPQQ9Y646 472 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 SLIT1O75093 1534 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CPED1A4D0V7 1026 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 LCA5LO95447 670 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TBC1D25Q3MII6 688 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TNFAIP8L2Q6P589 184 aaPredicted RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 Q8N9G6 341 aaPredicted RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 OR5AK3PQ8NH89 298 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 COPS7AQ9UBW8 275 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 MAGEL2Q9UJ55 1249 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CDH22Q9UJ99 828 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 MAFFQ9ULX9 164 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 CDKL1Q00532 357 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ZDHHC20Q5W0Z9 365 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 RASGRP3Q8IV61 690 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TTC29Q8NA56 475 aaPredicted RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 CCDC54Q8NEL0 328 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 NAT14Q8WUY8 206 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 HMGB4Q8WW32 186 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 GTPBP2Q9BX10 602 aaKnown RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 UCKL1Q9NWZ5 548 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 GRIP1Q9Y3R0 1128 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 OR51F1A6NGY5 319 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 PIP5K1BO14986 540 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TGFB1I1O43294 461 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 MTX2O75431 263 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 C2P06681 752 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ALDH3A2P51648 485 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 MTPNP58546 118 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 XKR4Q5GH76 650 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 IRF2BP2Q7Z5L9 587 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CPNE9Q8IYJ1 553 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ZNF781Q8N8C0 355 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 PARPBPQ9NWS1 579 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 PTCH2Q9Y6C5 1203 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ZNF536O15090 1300 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CYP3A7-CYP3A51PA0A087WV96 503 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TSPAN1O60635 241 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CLDN11O75508 207 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CYP3A7P24462 503 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CLCQ05315 142 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 NOMO1Q15155 1222 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TEX44Q53QW1 395 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 FEM1AQ9BSK4 669 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 OR2AG1Q9H205 316 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 EIF1AYO14602 144 aaKnown RBP17.95■□□□□ 0.46
SNX27-202ENST00000368841 FMO3P31513 532 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 CHIT1Q13231 466 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ALG3Q92685 438 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 TAPBPLQ9BX59 468 aa17.95■□□□□ 0.46
SNX27-202ENST00000368841 ZNF541Q9H0D2 1346 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 UGT1A9O60656 530 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 ITGB1P05556 798 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 PARP15Q460N3 678 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms