RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ZCCHC8Q6NZY4 707 aaKnown RBP9.87□□□□□ -0.83
TPM3-210ENST00000368530 TIFABQ6ZNK6 161 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 FAM47EQ6ZV65 393 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 PARS2Q7L3T8 475 aaKnown RBP9.87□□□□□ -0.83
TPM3-210ENST00000368530 CMC1Q7Z7K0 106 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 DENND6AQ8IWF6 608 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 OR6K2Q8NGY2 324 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 MAPK15Q8TD08 544 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 KCNE4Q8WWG9 221 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 ASB12Q8WXK4 309 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 NUDCD1Q96RS6 583 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 TRIB3Q96RU7 358 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 RANBP9Q96S59 729 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 HEPHQ9BQS7 1158 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 TM6SF2Q9BZW4 377 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 CEP44Q9C0F1 390 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 VPS11Q9H270 941 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 CAB39LQ9H9S4 337 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 SATB2Q9UPW6 733 aa9.87□□□□□ -0.83
TPM3-210ENST00000368530 IGLON5A6NGN9 336 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 OR51F1A6NGY5 319 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 J3QKU1 62 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 EFSO43281 561 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 AQP9O43315 295 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PDHA1P08559 390 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 NEFHP12036 1026 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 TYK2P29597 1187 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 GKP32189 559 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 SLC1A2P43004 574 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 RABIFP47224 123 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 ARCN1P48444 511 aaKnown RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 CCNHP51946 323 aaPredicted RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 PDX1P52945 283 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PGGT1BP53609 377 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 CSE1LP55060 971 aaKnown RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 UCNP55089 124 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 VAC14Q08AM6 782 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 TRAF2Q12933 501 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 MSLNQ13421 630 aaPredicted RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 LY6DQ14210 128 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 GRM3Q14832 879 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PTPRRQ15256 657 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 DEFB133Q30KQ1 61 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 ZNF470Q6ECI4 717 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 RETSATQ6NUM9 610 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 C16orf46Q6P387 395 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PTAR1Q7Z6K3 402 aaPredicted RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 PARGQ86W56 976 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PCDH20Q8N6Y1 951 aaKnown RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 ARMC2Q8NEN0 867 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 ACVR1CQ8NER5 493 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 OR6P1Q8NGX9 317 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 LRRC8CQ8TDW0 803 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 GRAMD1AQ96CP6 724 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PPP1R16AQ96I34 528 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 VPS39Q96JC1 886 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 ELAC2Q9BQ52 826 aaKnown RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 BOCQ9BWV1 1114 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 TDRD1Q9BXT4 1180 aaKnown RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 NSRP1Q9H0G5 558 aaKnown RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 ABCG4Q9H172 646 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 TCEAL2Q9H3H9 227 aaPredicted RBP9.86□□□□□ -0.83
TPM3-210ENST00000368530 DYRK4Q9NR20 520 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 SNX15Q9NRS6 342 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 THSD1Q9NS62 852 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 NSMCE4AQ9NXX6 385 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM3-210ENST00000368530 SLC39A10Q9ULF5 831 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 PCDHGA8Q9Y5G5 932 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 SPO11Q9Y5K1 396 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 ARL5AQ9Y689 179 aa9.86□□□□□ -0.83
TPM3-210ENST00000368530 TDRD6O60522 2096 aaKnown RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 COL6A6A6NMZ7 2263 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 CXorf51AA0A1B0GTR3 108 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 CPED1A4D0V7 1026 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 MROH6A6NGR9 719 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 CAPN8A6NHC0 703 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 C16orf96A6NNT2 1141 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 K7ENP7 123 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 AREL1O15033 823 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 LDB2O43679 373 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 PRLP01236 227 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 JUNDP17535 347 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 GABRB3P28472 473 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 SERPINB8P50452 374 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 ARSDP51689 593 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 HNRNPH2P55795 449 aaKnown RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 PRAMEP78395 509 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 PDE1CQ14123 709 aaPredicted RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 PDK4Q16654 411 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 GLIPR1L2Q4G1C9 344 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 TAF1BQ53T94 588 aaPredicted RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 INO80DQ53TQ3 878 aaPredicted RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 C3orf38Q5JPI3 329 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 GKAP1Q5VSY0 366 aaPredicted RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 BROXQ5VW32 411 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 NEPROQ6NW34 567 aa9.85□□□□□ -0.83
TPM3-210ENST00000368530 INO80CQ6PI98 192 aaPredicted RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 EFL1Q7Z2Z2 1120 aaKnown RBP9.85□□□□□ -0.83
TPM3-210ENST00000368530 SRLQ86TD4 932 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms