RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OR51F1A6NGY5 319 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 E7EVH7 732 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 UBXN7O94888 489 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 APRTP07741 180 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 FOXN2P32314 431 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 HALP42357 657 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 GFERP55789 205 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 ACVR1Q04771 509 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 CACNG1Q06432 222 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 DBN1Q16643 649 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 KCTD19Q17RG1 926 aaPredicted RBP18.55■□□□□ 0.56
CKS1B-203ENST00000368439 SKIDA1Q1XH10 827 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 PPP1R21Q6ZMI0 780 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 DTX1Q86Y01 620 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 ZNF778Q96MU6 729 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 INSM2Q96T92 566 aaPredicted RBP18.55■□□□□ 0.56
CKS1B-203ENST00000368439 WWP1Q9H0M0 922 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 EIF2B3Q9NR50 452 aaKnown RBP18.55■□□□□ 0.56
CKS1B-203ENST00000368439 SLC2A6Q9UGQ3 507 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 PCDHGA3Q9Y5H0 932 aa18.55■□□□□ 0.56
CKS1B-203ENST00000368439 C17orf113A0A1B0GUU1 675 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 HEATR9A2RTY3 570 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 CCDC162PA2VCL2 907 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 A8MU76 341 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 B4E171 279 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 RALBP11234 206 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 MTHFD1P11586 935 aaKnown RBP18.54■□□□□ 0.56
CKS1B-203ENST00000368439 TYRP1P17643 537 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 ADRA1DP25100 572 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 MSNP26038 577 aaKnown RBP18.54■□□□□ 0.56
CKS1B-203ENST00000368439 CSTF2P33240 577 aaKnown RBP eCLIP18.54■□□□□ 0.56
CKS1B-203ENST00000368439 TSPAN7P41732 249 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 LMAN1P49257 510 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 TGIF1Q15583 401 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 SNAP47Q5SQN1 464 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 TSTD2Q5T7W7 516 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 C4orf22Q6V702 233 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 ZFAND4Q86XD8 727 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 SPDYE1Q8NFV5 336 aaPredicted RBP18.54■□□□□ 0.56
CKS1B-203ENST00000368439 RSC1A1Q92681 617 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 FCRL3Q96P31 734 aaPredicted RBP18.54■□□□□ 0.56
CKS1B-203ENST00000368439 TAAR9Q96RI9 348 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 CPNE5Q9HCH3 593 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 HOMER3Q9NSC5 361 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 ACSL5Q9ULC5 683 aa18.54■□□□□ 0.56
CKS1B-203ENST00000368439 TTC7AQ9ULT0 858 aaPredicted RBP18.54■□□□□ 0.56
CKS1B-203ENST00000368439 CACNA1GO43497 2377 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.53■□□□□ 0.56
CKS1B-203ENST00000368439 CFAP99D6REC4 459 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 ANKRD34CP0C6C1 535 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 LIPCP11150 499 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 CAPZBP47756 277 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 PPM1FP49593 454 aaPredicted RBP18.53■□□□□ 0.56
CKS1B-203ENST00000368439 CAPRIN2Q6IMN6 1127 aaKnown RBP18.53■□□□□ 0.56
CKS1B-203ENST00000368439 TTC27Q6P3X3 843 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 ZNF534Q76KX8 674 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 TAS2R42Q7RTR8 314 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 PLXDC1Q8IUK5 500 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 CFAP206Q8IYR0 622 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 CLDN19Q8N6F1 224 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 HM13Q8TCT9 377 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 SNRNP27Q8WVK2 155 aaKnown RBP18.53■□□□□ 0.56
CKS1B-203ENST00000368439 ART4Q93070 314 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 MS4A14Q96JA4 679 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 PDLIM2Q96JY6 352 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 PBKQ96KB5 322 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 C9orf72Q96LT7 481 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 RMDN2Q96LZ7 410 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 DDA1Q9BW61 102 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 ZMYND15Q9H091 742 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 KLHL3Q9UH77 587 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 TCAF1Q9Y4C2 921 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 B3GALT1Q9Y5Z6 326 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 CFAP20Q9Y6A4 193 aaKnown RBP18.53■□□□□ 0.56
CKS1B-203ENST00000368439 PRSS21Q9Y6M0 314 aa18.53■□□□□ 0.56
CKS1B-203ENST00000368439 SMG1Q96Q15 3661 aaKnown RBP18.53■□□□□ 0.56
CKS1B-203ENST00000368439 EFCAB7A8K855 629 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 CAPN5O15484 640 aaPredicted RBP18.52■□□□□ 0.56
CKS1B-203ENST00000368439 EFSO43281 561 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 GAS8O95995 478 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 AMD1P17707 334 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 CD82P27701 267 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 LEPRP48357 1165 aaKnown RBP18.52■□□□□ 0.56
CKS1B-203ENST00000368439 UCNP55089 124 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 TMPRSS3P57727 454 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 CXADRP78310 365 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 MC2RQ01718 297 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 LAMB3Q13751 1172 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 ITIH4Q14624 930 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 BROXQ5VW32 411 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 DUS1LQ6P1R4 473 aaKnown RBP18.52■□□□□ 0.56
CKS1B-203ENST00000368439 GSTA5Q7RTV2 222 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 JPH3Q8WXH2 748 aaPredicted RBP18.52■□□□□ 0.56
CKS1B-203ENST00000368439 HDAC10Q969S8 669 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 BBC3Q96PG8 261 aaPredicted RBP18.52■□□□□ 0.56
CKS1B-203ENST00000368439 CCM2Q9BSQ5 444 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 RAB33BQ9H082 229 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 COG4Q9H9E3 785 aa18.52■□□□□ 0.56
CKS1B-203ENST00000368439 IMP3Q9NV31 184 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms