RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GRASPQ7Z6J2 395 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 LRRC57Q8N9N7 239 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 FNIP1Q8TF40 1166 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 Q96MT0 163 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 CIB1Q99828 191 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 ST6GALNAC4Q9H4F1 302 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 CARS2Q9HA77 564 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 KCND1Q9NSA2 647 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SRRDQ9UH36 339 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 GMEB2Q9UKD1 530 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SPIRE1Q08AE8 756 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TEAD2Q15562 447 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 CARD16Q5EG05 197 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 Q6ZVU0 165 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 GTPBP2Q9BX10 602 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 PIGVQ9NUD9 493 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 DNAJC28Q9NX36 388 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SESN1Q9Y6P5 492 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 A0A1W2PQ45 241 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 A0A1W2PQY0 241 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TCRBV7S3A2A0A539 114 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 CHRNGP07510 517 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 AP1S1P61966 158 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 NAIF1Q69YI7 327 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 TSTD1Q8NFU3 115 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 PLEKHG4BQ96PX9 1271 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 YIPF4Q9BSR8 244 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 RIOK2Q9BVS4 552 aaKnown RBP12.75□□□□□ -0.37
PTPRK-207ENST00000368226 MCUBQ9NWR8 336 aa12.75□□□□□ -0.37
PTPRK-207ENST00000368226 SLC35G6P0C7Q6 338 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 PAX7P23759 505 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 TAF1AQ15573 450 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 CRYBG2Q8N1P7 616 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 RTKNQ9BST9 563 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 RACGAP1Q9H0H5 632 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 TCEA3O75764 348 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ETS2P15036 469 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 RCVRNP35243 200 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ACTR1BP42025 376 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ACTR1AP61163 376 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ECT2LQ008S8 904 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 SLC10A7Q0GE19 358 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 CXorf57Q6NSI4 855 aaKnown RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 OR10H5Q8NGA6 315 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 PSMA8Q8TAA3 256 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 TMEM138Q9NPI0 162 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 SLC35C2Q9NQQ7 365 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 TLR6Q9Y2C9 796 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 AP4B1Q9Y6B7 739 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ADH5P11766 374 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 RPL10P27635 214 aaKnown RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 NAA20P61599 178 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ACAP2Q15057 778 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 MZT2AQ6P582 158 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 MCEMP1Q8IX19 187 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 DEPDC4Q8N2C3 294 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 CCDC162PA2VCL2 907 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 NIPSNAP2O75323 286 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ARCN1P48444 511 aaKnown RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 CREB5Q02930 508 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 NPY5RQ15761 445 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 SMARCD3Q6STE5 483 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 RAPGEFL1Q9UHV5 662 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 GPD2P43304 727 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 TOP3AQ13472 1001 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■■■■ 29.3
PTPRK-207ENST00000368226 SLC8B1Q6J4K2 584 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 FSTL5Q8N475 847 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 BRSK1Q8TDC3 778 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 C12orf42Q96LP6 360 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 MRPS30Q9NP92 439 aaKnown RBP12.74□□□□□ -0.37
PTPRK-207ENST00000368226 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
PTPRK-207ENST00000368226 CICQ96RK0 1608 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 KPNA4O00629 521 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 PSIP1O75475 530 aaKnown RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 OMPP47874 163 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 TEAD4Q15561 434 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 FBXL22Q6P050 247 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 CERS6Q6ZMG9 384 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 TTC29Q8NA56 475 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 NKD2Q969F2 451 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 GTPBP3Q969Y2 492 aaKnown RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 IRAK2O43187 625 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 HLA-EP13747 358 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 C4BPBP20851 252 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 MYL9P24844 172 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 RBBP4Q09028 425 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 CMTM8Q8IZV2 173 aa12.73□□□□□ -0.37
PTPRK-207ENST00000368226 RBM18Q96H35 190 aaKnown RBP12.73□□□□□ -0.37
PTPRK-207ENST00000368226 MAGEL2Q9UJ55 1249 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms