RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PM20D2Q8IYS1 436 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PGLYRP2Q96PD5 576 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 WDR6Q9NNW5 1121 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 COMMD3Q9UBI1 195 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MID1O15344 667 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PRG2P13727 222 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PPIBP23284 216 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 IRF9Q00978 393 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 SLC13A2Q13183 592 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ZNF655Q8N720 491 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 NETO2Q8NC67 525 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 C9orf43Q8TAL5 461 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 DHRS1Q96LJ7 313 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MUS81Q96NY9 551 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 KCNE2Q9Y6J6 123 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 IGKV6D-41A0A0C4DH26 115 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 M0R2N6 131 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 LPOP22079 712 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 CES1P23141 567 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 GTF2E2P29084 291 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 SERPINA4P29622 427 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 GRK4P32298 578 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 RPL9P32969 192 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 FAUP35544 74 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ATP5C1P36542 298 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 KCNJ8Q15842 424 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 CGB2Q6NT52 195 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ARMC6Q6NXE6 501 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 OR4L1Q8NH43 312 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 COPS5Q92905 334 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ZUFSPQ96AP4 578 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 CRELD1Q96HD1 420 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 C2orf49Q9BVC5 232 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 SLA2Q9H6Q3 261 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ASB8Q9H765 288 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 RPF2Q9H7B2 306 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PAK6Q9NQU5 681 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MAP10Q9P2G4 905 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 XPNPEP2O43895 674 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 OR2B3O76000 313 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MTPNP58546 118 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 SREBF2Q12772 1141 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 GALNT3Q14435 633 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PIK3R6Q5UE93 754 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 ABHD11Q8NFV4 315 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 TEFMQ96QE5 360 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
SHPRH-202ENST00000367503 PRDM8Q9NQV8 689 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 NCKAP1Q9Y2A7 1128 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 IRAK3Q9Y616 596 aa12.13□□□□□ -0.47
SHPRH-202ENST00000367503 CELF2O95319 508 aaKnown RBP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 MAGEA2P43356 314 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 BMXP51813 675 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 LCP2Q13094 533 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 RFTN1Q14699 578 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PCLAFQ15004 111 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 DUS1LQ6P1R4 473 aaKnown RBP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 HEXDCQ8WVB3 486 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 B3GNT5Q9BYG0 378 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 MIR1-1HGQ9H1L0 117 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 IFT52Q9Y366 437 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PCDHA2Q9Y5H9 948 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 TEX264Q9Y6I9 313 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 hCG_2039718K7EN88 272 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PDHXO00330 501 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 CHST10O43529 356 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 ARL2P36404 184 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 RPL3P39023 403 aaKnown RBP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 SCNN1GP51170 649 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PPP5CP53041 499 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 FAM91A1Q658Y4 838 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 UROC1Q96N76 676 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 POLR3BQ9NW08 1133 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 ZNF879B4DU55 563 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PLOD2O00469 737 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 RASAL1O95294 804 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PTTG1O95997 202 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 CYP2A6P11509 494 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-202ENST00000367503 PTPN3P26045 913 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 SLC5A2P31639 672 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 GSK3BP49841 420 aa12.12□□□□□ -0.47
SHPRH-202ENST00000367503 SMARCB1Q12824 385 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms