RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 IL23RQ5VWK5 629 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 GOLM1Q8NBJ4 401 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 LPPQ93052 612 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 TMEM209Q96SK2 561 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 CRISPLD1Q9H336 500 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 ABCB10Q9NRK6 738 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 RP1P56715 2156 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 LINC00854A0A1B0GVQ3 168 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 SPTLC1O15269 473 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 CCR4P51679 360 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 FSTL1Q12841 308 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 DUSP4Q13115 394 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 KHDC1Q4VXA5 237 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZBED6CLQ96FA7 236 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 PADI3Q9ULW8 664 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 SEPT4O43236 478 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 PRPS1L1P21108 318 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 IL18R1Q13478 541 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 IRF5Q13568 498 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 DLG2Q15700 870 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 HID1Q8IV36 788 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 DENND6AQ8IWF6 608 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 POPDC3Q9HBV1 291 aa11.9□□□□□ -0.5
CDC42BPA-203ENST00000366766 MAGEB17A8MXT2 336 aa11.9□□□□□ -0.51
CDC42BPA-203ENST00000366766 SLC25A11Q02978 314 aaKnown RBP11.9□□□□□ -0.51
CDC42BPA-203ENST00000366766 KLHL22Q53GT1 634 aa11.9□□□□□ -0.51
CDC42BPA-203ENST00000366766 LRRC70Q7Z2Q7 622 aa11.9□□□□□ -0.51
CDC42BPA-203ENST00000366766 GPR156Q8NFN8 814 aa11.9□□□□□ -0.51
CDC42BPA-203ENST00000366766 KLRG2A4D1S0 409 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 SSNA1O43805 119 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 NUDT14O95848 222 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 KIFC1Q9BW19 673 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 TAS2R1Q9NYW7 299 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 DEFB132Q7Z7B7 95 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 FAM83DQ9H4H8 585 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZNHIT2Q9UHR6 403 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 HNF4AP41235 474 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 DNAJB13P59910 316 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 NDUFA9Q16795 377 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 TRPM4Q8TD43 1214 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 MSI1O43347 362 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 MED22Q15528 200 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 BRAT1Q6PJG6 821 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 MTFMTQ96DP5 389 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 GPR22Q99680 433 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 PYDC2Q56P42 97 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 LPGAT1Q92604 370 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CXorf21Q9HAI6 301 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 PDP1Q9P0J1 537 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 ANXA8P13928 327 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 DDX6P26196 483 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 PEX2P28328 305 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 SLC1A2P43004 574 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CDH13P55290 713 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 TUBA1BP68363 451 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 DOK6Q6PKX4 331 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 TUBA1AQ71U36 451 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 PI15O43692 258 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 VNN1O95497 513 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CDH1P12830 882 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 PROZP22891 400 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CLCNKBP51801 687 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 CYS1Q717R9 158 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 VN1R5Q7Z5H4 357 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 ACADVLP49748 655 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 PAFAH1B3Q15102 231 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 DCST1Q5T197 706 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 RTL4Q6ZR62 310 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 C7orf43Q8WVR3 580 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 NSMCE3Q96MG7 304 aa11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 GPN1Q9HCN4 374 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-203ENST00000366766 TIE1P35590 1138 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 PWWP2AQ96N64 755 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 GPATCH1Q9BRR8 931 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 APOBEC3GQ9HC16 384 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 EFCAB3Q8N7B9 438 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 SLC38A4Q969I6 547 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 APOLD1Q96LR9 279 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 PCDHGB1Q9Y5G3 927 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 LTBP3Q9NS15 1303 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 SEC16AO15027 2179 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ATP12AP54707 1039 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 DEF8Q6ZN54 512 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 OTOP3Q7RTS5 596 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 MIPEPQ99797 713 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 PTPRHQ9HD43 1115 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 TAS2R7Q9NYW3 318 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 STXBP1P61764 594 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 KRT77Q7Z794 578 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 OXR1Q8N573 874 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 HAVCR1Q96D42 359 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms