RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TRIM73Q86UV7 250 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TREML1Q86YW5 311 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 SPATA22Q8NHS9 363 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 FIZ1Q96SL8 496 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 SMOC2Q9H3U7 446 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 SFMBT1Q9UHJ3 866 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 ARFGEF1Q9Y6D6 1849 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 YJEFN3A6XGL0 299 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 INSIG1O15503 277 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 KCNE1P15382 129 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 HNMTP50135 292 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CLEC20AQ6ZU45 233 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 A0A0G2JLL6 359 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 MSI1O43347 362 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 XYLBO75191 536 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 MT-CYBP00156 380 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 IRF9Q00978 393 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 USP41Q3LFD5 358 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 NIPAL1Q6NVV3 410 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 PRRT2Q7Z6L0 340 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF467Q7Z7K2 595 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 C2CD4AQ8NCU7 369 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TBATAQ96M53 351 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 PER2O15055 1255 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 PYDC2Q56P42 97 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 SH3PXD2AQ5TCZ1 1133 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 FAM151BQ6UXP7 276 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 RALGPS2Q86X27 583 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZC3H7AQ8IWR0 971 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 USP29Q9HBJ7 922 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 IRAK2O43187 625 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 UPP2O95045 317 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 GOT2P00505 430 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CAPN1P07384 714 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 LINGO3P0C6S8 592 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 PEX6Q13608 980 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 DDI2Q5TDH0 399 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 DENND1CQ8IV53 801 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 DNAJC1Q96KC8 554 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CGREF1Q99674 301 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 STRCQ7RTU9 1775 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 MED22Q15528 200 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 HDAC2Q92769 488 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 NPY6RQ99463 290 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TMPRSS4Q9NRS4 437 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 PIRTP0C851 137 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 FEN1P39748 380 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 SCAPQ12770 1279 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 IKBKEQ14164 716 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 CA9Q16790 459 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 TSGA13Q96PP4 275 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 PKP2Q99959 881 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 BCL7BQ9BQE9 202 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 XYLT2Q9H1B5 865 aa11.66□□□□□ -0.54
CDC42BPA-202ENST00000366764 FAM149AA5PLN7 773 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 PTSQ03393 145 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 KIAA1191Q96A73 305 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 AKTIPQ9H8T0 292 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 A0A1W2PQH9 124 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ABCB7O75027 752 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 NSG1P42857 185 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 LGALS3BPQ08380 585 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ATG14Q6ZNE5 492 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 CILP2Q8IUL8 1156 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 DERL2Q9GZP9 239 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 MEAF6Q9HAF1 191 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ATG13O75143 517 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 RASAL1O95294 804 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ANXA8P13928 327 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 NANOGNBQ7Z5D8 188 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 IGDCC3Q8IVU1 814 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SMYD1Q8NB12 490 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 OR4A15Q8NGL6 344 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 BTN2A2Q8WVV5 523 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 TTPALQ9BTX7 342 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 DHFRP00374 187 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 TLX1P31314 330 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 GSK3BP49841 420 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 KCNN2Q9H2S1 579 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 MKLN1Q9UL63 735 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 TSPAN3O60637 253 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 CYP11A1P05108 521 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 DNAJA1P31689 397 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 BCAP31P51572 246 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 SCIMPQ6UWF3 145 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 RHEBL1Q8TAI7 183 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ZNF671Q8TAW3 534 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 PCDH12Q9NPG4 1184 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 TNFRSF21O75509 655 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 ENO2P09104 434 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 MYL9P24844 172 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 PBLDP30039 288 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 GALNT1Q10472 559 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 LAPTM5Q13571 262 aa11.65□□□□□ -0.54
CDC42BPA-202ENST00000366764 GPR33Q49SQ1 333 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms