RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 HLA-DPA1P20036 260 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ACVR2AP27037 513 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZFP36L2P47974 494 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ARPC4P59998 168 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 UFM1P61960 85 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 TRAF3Q13114 568 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 CDK5R2Q13319 367 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 PCSK7Q16549 785 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 RBBP7Q16576 425 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 CTU2Q2VPK5 515 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ADPRMQ3LIE5 342 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZNF404Q494X3 552 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZNF789Q5FWF6 425 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 MANEALQ5VSG8 457 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 CAPN13Q6MZZ7 669 aaPredicted RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZNF549Q6P9A3 640 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 GPRIN3Q6ZVF9 776 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 PIWIL3Q7Z3Z3 882 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 OSTM1Q86WC4 334 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 PSMA8Q8TAA3 256 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 RASSF5Q8WWW0 418 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 PROX1Q92786 737 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZNF486Q96H40 463 aaPredicted RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZNF382Q96SR6 550 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 AARSD1Q9BTE6 412 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 AMBRA1Q9C0C7 1298 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 SLC39A8Q9C0K1 460 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 HOXD1Q9GZZ0 328 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 NACA2Q9H009 215 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 NXF3Q9H4D5 531 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 DUSP21Q9H596 190 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 CATSPERZQ9NTU4 200 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 DNMT3BQ9UBC3 853 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ADGRE2Q9UHX3 823 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 OSGIN1Q9UJX0 560 aa8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ZFC3H1O60293 1989 aaKnown RBP8.97□□□□□ -0.97
SMYD3-201ENST00000366516 ELOVL7A1L3X0 281 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 TTC34A8MYJ7 566 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 IRAK2O43187 625 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 RPP40O75818 363 aaKnown RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SNX4O95219 450 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 MED26O95402 600 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 DLGAP3O95886 979 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 IGLV3-25P01717 112 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SLC4A1P02730 911 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 IGFBP5P24593 272 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PSMB9P28065 219 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 KCNC1P48547 511 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 NRIP1P48552 1158 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 CLK1P49759 484 aaKnown RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 STC1P52823 247 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SLC35A2P78381 396 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PRKCDQ05655 676 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 VAC14Q08AM6 782 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 CLCA4Q14CN2 919 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 OR4D1Q15615 310 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 TYSND1Q2T9J0 566 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 Q3C1V9 767 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 C6orf136Q5SQH8 315 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 MARC1Q5VT66 337 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PNCKQ6P2M8 343 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SHQ1Q6PI26 577 aaKnown RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 DLEU7Q6UYE1 221 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 USP43Q70EL4 1123 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PIM3Q86V86 326 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 DCP2Q8IU60 420 aaKnown RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 LYSMD2Q8IV50 215 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 FAM9CQ8IZT9 166 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 KBTBD8Q8NFY9 601 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 NDNFQ8TB73 568 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PROKR1Q8TCW9 393 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 ATL1Q8WXF7 558 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 FIG4Q92562 907 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 COPS5Q92905 334 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 LGALS12Q96DT0 336 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PPP3R2Q96LZ3 170 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 CEP295NLQ96MC4 621 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 KCNA7Q96RP8 456 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SMOQ99835 787 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SLIRPQ9GZT3 109 aaKnown RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SEMA4BQ9NPR2 832 aaPredicted RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SCUBE2Q9NQ36 999 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 SACM1LQ9NTJ5 587 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 GIMAP2Q9UG22 337 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 RAPGEFL1Q9UHV5 662 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 METRNQ9UJH8 293 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 MKLN1Q9UL63 735 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 NEU3Q9UQ49 428 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 COLQQ9Y215 455 aaPredicted RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 TNPO3Q9Y5L0 923 aaKnown RBP8.96□□□□□ -0.97
SMYD3-201ENST00000366516 PTGDR2Q9Y5Y4 395 aa8.96□□□□□ -0.97
SMYD3-201ENST00000366516 AGAP5A6NIR3 686 aa8.96□□□□□ -0.98
SMYD3-201ENST00000366516 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
SMYD3-201ENST00000366516 EFCAB9A8MZ26 197 aa8.96□□□□□ -0.98
SMYD3-201ENST00000366516 FAM220BPB1ANY3 271 aa8.96□□□□□ -0.98
SMYD3-201ENST00000366516 C9JVG2 144 aa8.96□□□□□ -0.98
SMYD3-201ENST00000366516 TOR1BO14657 336 aa8.96□□□□□ -0.98
SMYD3-201ENST00000366516 RAD51BO15315 384 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms