RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SPARCL1Q14515 664 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LONRF2Q1L5Z9 754 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PARP6Q2NL67 630 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZNF658BQ4V348 819 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FNBP1LQ5T0N5 605 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZNF605Q86T29 641 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZSCAN1Q8NBB4 408 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TTC13Q8NBP0 860 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NAT14Q8WUY8 206 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TGM7Q96PF1 710 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 DESI2Q9BSY9 194 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ASB8Q9H765 288 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 IGLV3-16A0A075B6K0 115 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TRBV5-4A0A0C4DH59 114 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 B8ZZF3 427 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 POLR1CO15160 346 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 STK17BO94768 372 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FTCDO95954 541 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MTHFD1P11586 935 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MSH3P20585 1137 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PPM1FP49593 454 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SH3BP2P78314 561 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MAP7Q14244 749 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CAPRIN2Q6IMN6 1127 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NXPE1Q8N323 547 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 RNF10Q8N5U6 811 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 IL22RA1Q8N6P7 574 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FAM71DQ8N9W8 422 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZFPM2Q8WW38 1151 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SLC45A3Q96JT2 553 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 INSM2Q96T92 566 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ACSL5Q9ULC5 683 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PSMD13Q9UNM6 376 aa13.38□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GOLGA6L9A6NEM1 432 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FGF5P12034 268 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NELFEP18615 380 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 AKT1P31749 480 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 HADHAP40939 763 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PRLHRP49683 370 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PPP1CAP62136 330 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 IL11RAQ14626 422 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MICALCLQ6ZW33 695 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 DET1Q7L5Y6 550 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SNX20Q7Z614 316 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TXLNBQ8N3L3 684 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZDHHC12Q96GR4 267 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SLC41A2Q96JW4 573 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TMEM121Q9BTD3 319 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 WWP1Q9H0M0 922 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TRIT1Q9H3H1 467 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 STARD5Q9NSY2 213 aa13.37□□□□□ -0.27
TNFRSF1A-202ENST00000366159 IGHV5-51A0A0C4DH38 117 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 C17orf113A0A1B0GUU1 675 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CCL22O00626 93 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TERTO14746 1132 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 AP2A1O95782 977 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZNF28P17035 718 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 STAT5AP42229 794 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SEPHS1P49903 392 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CDKN1CP49918 316 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 OASLQ15646 514 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CRTC2Q53ET0 693 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CACHD1Q5VU97 1274 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LILRA3Q8N6C8 439 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 HEXDCQ8WVB3 486 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ULK4Q96C45 1275 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 DNAJC1Q96KC8 554 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 OR6C1Q96RD1 312 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 COPS8Q99627 209 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LRRC40Q9H9A6 602 aa13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NLE1Q9NVX2 485 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CFAP20Q9Y6A4 193 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-202ENST00000366159 OR5K3A6NET4 321 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FAM87AP0C7U9 286 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 TPH1P17752 444 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ITGALP20701 1170 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 F8A1P23610 371 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ACRV1P26436 265 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PBLDP30039 288 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MC4RP32245 332 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FOXM1Q08050 763 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 P3H1Q32P28 736 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms