RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GALNT18Q6P9A2 607 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TTLL10Q6ZVT0 673 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CAND1Q86VP6 1230 aaKnown RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 PTGR2Q8N8N7 351 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 COX18Q8N8Q8 333 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 TRPV1Q8NER1 839 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ANKK1Q8NFD2 765 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 OR8K5Q8NH50 307 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CD99L2Q8TCZ2 262 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 HTR3CQ8WXA8 447 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 MMABQ96EY8 250 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 OR52E6Q96RD3 313 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PAPOLGQ9BWT3 736 aaKnown RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 MEMO1Q9Y316 297 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NRP2O60462 931 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 ICAM3P32942 547 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 PSEN1P49768 467 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 UBQLNLQ8IYU4 475 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 HJURPQ8NCD3 748 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 CASKIN2Q8WXE0 1202 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 NDC1Q9BTX1 674 aa9.67□□□□□ -0.86
CHD3-202ENST00000358181 DNMT3AQ9Y6K1 912 aaPredicted RBP9.67□□□□□ -0.86
CHD3-202ENST00000358181 GRXCR1A8MXD5 290 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 LYPLAL1Q5VWZ2 237 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 MOXD1Q6UVY6 613 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 OR7A2PQ8NGA2 310 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 MAP3K14Q99558 947 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 TCF7L1Q9HCS4 588 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ABCB8Q9NUT2 735 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 GMIPQ9P107 970 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 INPPL1O15357 1258 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 FOXP2O15409 715 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ADSSP30520 456 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SEMG2Q02383 582 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 TLE2Q04725 743 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 TATDN1Q6P1N9 297 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 FAM84AQ96KN4 292 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 C17orf62Q9BQA9 187 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 TRMT61BQ9BVS5 477 aaKnown RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 ANKEF1Q9NU02 776 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SGCEO43556 437 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 RAD51DO75771 328 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 MLYCDO95822 493 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 PSMB4P28070 264 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SHMT1P34896 483 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 RPS9P46781 194 aaKnown RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 PTPN11Q06124 597 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 AADACL2Q6P093 401 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 LINGO4Q6UY18 593 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ZNF782Q6ZMW2 699 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 SENP8Q96LD8 212 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ANKRD6Q9Y2G4 727 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 RBMX2Q9Y388 322 aaKnown RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ELOA3DA6NLF2 546 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 B8ZZF3 427 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 PLD2O14939 933 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SCO1O75880 301 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 TRBC1P01850 177 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 IGFBP1P08833 259 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 ATF4P18848 351 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 PRKAR1BP31321 381 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ELOA3BQ3SY89 546 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 CDONQ4KMG0 1287 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 BRMS1LQ5PSV4 323 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SLC27A1Q6PCB7 646 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 PSTKQ8IV42 348 aaKnown RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 ELOA2Q8IYF1 753 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 KATNAL2Q8IYT4 538 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ELOA3Q8NG57 546 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 MCFD2Q8NI22 146 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 C9orf16Q9BUW7 83 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SLC25A23Q9BV35 468 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 IFT27Q9BW83 186 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ACP6Q9NPH0 428 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 RPH3ALQ9UNE2 315 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 MYRFQ9Y2G1 1151 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 A0A1B0GVT2 93 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 CARNS1A5YM72 827 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SLC16A8O95907 504 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 SLC35G6P0C7Q6 338 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 POU2F1P14859 743 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 RBMS1P29558 406 aaKnown RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 HCAR3P49019 387 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 OLR1P78380 273 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 MRPS22P82650 360 aaKnown RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 SLC10A7Q0GE19 358 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 EXOC3L2Q2M3D2 409 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 ESCO2Q56NI9 601 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 PLEKHA3Q9HB20 300 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 TREM1Q9NP99 234 aa9.66□□□□□ -0.86
CHD3-202ENST00000358181 BARX2Q9UMQ3 279 aaPredicted RBP9.66□□□□□ -0.86
CHD3-202ENST00000358181 A0A1B0GV50 99 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 ARGFXA6NJG6 315 aa9.65□□□□□ -0.86
CHD3-202ENST00000358181 FOSL1P15407 271 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms