RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 ZNF24P17028 368 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 GRK3P35626 688 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 MSANTD2Q6P1R3 559 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 FAM126BQ8IXS8 530 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 OR2T12Q8NG77 320 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 OR5K1Q8NHB7 308 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 FBXO30Q8TB52 745 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 FIG4Q92562 907 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 C1orf74Q96LT6 269 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 C17orf80Q9BSJ5 609 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 HERC2P3Q9BVR0 1158 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 CCDC90BQ9GZT6 254 aa23.4■■□□□ 1.34
NPAS3-203ENST00000357798 CDC7O00311 574 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 GSTA4O15217 222 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 SLC16A6O15403 523 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 NDST3O95803 873 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 HLA-DPA1P20036 260 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 ACVR2AP27037 513 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 EMX1Q04741 257 aaPredicted RBP23.39■■□□□ 1.34
NPAS3-203ENST00000357798 PTPRCAPQ14761 206 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 PHKG1Q16816 387 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 ADPRMQ3LIE5 342 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 Q6ZSR9 355 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 HS3ST5Q8IZT8 346 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 OR52E4Q8NGH9 312 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 OR13C4Q8NGS5 318 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 BLOC1S5Q8TDH9 187 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 ZNF382Q96SR6 550 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 ACTR8Q9H981 624 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 SACM1LQ9NTJ5 587 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 MED16Q9Y2X0 877 aa23.39■■□□□ 1.34
NPAS3-203ENST00000357798 DOCK4Q8N1I0 1966 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 NPEPPSL1A6NEC2 478 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 PTGES3LE9PB15 166 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 M0QX08 132 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 GNGT2O14610 69 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 HAPLN1P10915 354 aaPredicted RBP23.39■■□□□ 1.33
NPAS3-203ENST00000357798 RFX4Q33E94 735 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 ZC3H12BQ5HYM0 836 aaKnown RBP23.39■■□□□ 1.33
NPAS3-203ENST00000357798 SPESP1Q6UW49 350 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 NAT16Q8N8M0 369 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 NDNFQ8TB73 568 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 RORBQ92753 470 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 YIPF6Q96EC8 236 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 TRIT1Q9H3H1 467 aaKnown RBP23.39■■□□□ 1.33
NPAS3-203ENST00000357798 LIMD1Q9UGP4 676 aa23.39■■□□□ 1.33
NPAS3-203ENST00000357798 RHOQP17081 205 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 CRYBB1P53674 252 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 KCNJ8Q15842 424 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 HIST2H2ACQ16777 129 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 CCDC80Q76M96 950 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 ADCK1Q86TW2 530 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 ADHFE1Q8IWW8 467 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 EID3Q8N140 333 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 PGBD5Q8N414 524 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 NKAPQ8N5F7 415 aaKnown RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 ZNF548Q8NEK5 533 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 ACBD6Q9BR61 282 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 ACTL8Q9H568 366 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 ADGRE2Q9UHX3 823 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 PTPRDP23468 1912 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 HS6ST1O60243 411 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 OR4F21O95013 312 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 F2P00734 622 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 HNRNPFP52597 415 aaKnown RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 PAGE2BQ5JRK9 111 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 PIK3R6Q5UE93 754 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 CYP20A1Q6UW02 462 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 CYP2U1Q7Z449 544 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 SNX29P2Q8IUI4 249 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 BRSK1Q8TDC3 778 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 PRDM5Q9NQX1 630 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 GALPQ9UBC7 116 aa23.38■■□□□ 1.33
NPAS3-203ENST00000357798 INTS6Q9UL03 887 aaKnown RBP23.38■■□□□ 1.33
NPAS3-203ENST00000357798 UBA6A0AVT1 1052 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-203ENST00000357798 ENPP3O14638 875 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 CDK5R2Q13319 367 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 DNASE1L3Q13609 305 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 DYNC2LI1Q8TCX1 351 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 SCUBE2Q9NQ36 999 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 FAM50BQ9Y247 325 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 THP07101 528 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 ANKRD34AQ69YU3 496 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 CDYL2Q8N8U2 506 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 ATP6V0D2Q8N8Y2 350 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 GLMNQ92990 594 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 PSMG2Q969U7 264 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 TMLHEQ9NVH6 421 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 TMEM248Q9NWD8 314 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 PMF1-BGLAPU3KQ54 211 aa23.37■■□□□ 1.33
NPAS3-203ENST00000357798 NCF1BA6NI72 391 aaPredicted RBP23.36■■□□□ 1.33
NPAS3-203ENST00000357798 NCF1CA8MVU1 366 aaPredicted RBP23.36■■□□□ 1.33
NPAS3-203ENST00000357798 BTN3A1O00481 513 aa23.36■■□□□ 1.33
NPAS3-203ENST00000357798 ANKRD28O15084 1053 aa23.36■■□□□ 1.33
NPAS3-203ENST00000357798 SCELO95171 688 aa23.36■■□□□ 1.33
NPAS3-203ENST00000357798 ITGAMP11215 1152 aa23.36■■□□□ 1.33
NPAS3-203ENST00000357798 NCF1P14598 390 aaPredicted RBP23.36■■□□□ 1.33
NPAS3-203ENST00000357798 ADAM17P78536 824 aa23.36■■□□□ 1.33
NPAS3-203ENST00000357798 PGS1Q32NB8 556 aa23.36■■□□□ 1.33
NPAS3-203ENST00000357798 HABP4Q5JVS0 413 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms