RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 DNAJB8Q8NHS0 232 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 PSKH2Q96QS6 385 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 MAGEH1Q9H213 219 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 TOR3AQ9H497 397 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 ABI2Q9NYB9 513 aaPredicted RBP17.47■□□□□ 0.39
RTN4-204ENST00000357732 CD274Q9NZQ7 290 aa17.47■□□□□ 0.39
RTN4-204ENST00000357732 GLTPD2A6NH11 291 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ANKRD28O15084 1053 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 RSL1D1O76021 490 aaKnown RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 OR4F21O95013 312 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ITIH1P19827 911 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 MAD2L1Q13257 205 aaPredicted RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 SULT1C3Q6IMI6 304 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 CYP20A1Q6UW02 462 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 CHST15Q7LFX5 561 aaPredicted RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 NECAB2Q7Z6G3 386 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 MINDY2Q8NBR6 621 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 GLB1L3Q8NCI6 653 aaPredicted RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 OR4K2Q8NGD2 314 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 PPP3R2Q96LZ3 170 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ACOX2Q99424 681 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 MAGIXQ9H6Y5 334 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 C3orf18Q9UK00 162 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ITGB1BP2Q9UKP3 347 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 GOLGA8CPA6NN73 597 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 LSM1O15116 133 aaKnown RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 SCELO95171 688 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 MT-ND1P03886 318 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ACVRL1P37023 503 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 PLA2G16P53816 162 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 CACNB2Q08289 660 aaPredicted RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 ZC3H12BQ5HYM0 836 aaKnown RBP17.46■□□□□ 0.39
RTN4-204ENST00000357732 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 SDHAF4Q5VUM1 108 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 SLC15A4Q8N697 577 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 CDYL2Q8N8U2 506 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 OR2T12Q8NG77 320 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 CD200R1Q8TD46 325 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 MUL1Q969V5 352 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ZNF583Q96ND8 569 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ZBTB18Q99592 522 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 ADNPQ9H2P0 1102 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.46■□□□□ 0.39
RTN4-204ENST00000357732 MARCH2Q9P0N8 246 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 PADI3Q9ULW8 664 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 PCDHGB1Q9Y5G3 927 aa17.46■□□□□ 0.39
RTN4-204ENST00000357732 TMEM221A6NGB7 291 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 TMEM189-UBE2V1I3L0A0 370 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 KPNA4O00629 521 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 FOXD2O60548 495 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 ESR1P03372 595 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 LPOP22079 712 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 ERVPABLB-1P60509 514 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ZNF846Q147U1 533 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ZIK1Q3SY52 487 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 CPNE9Q8IYJ1 553 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 STK40Q8N2I9 435 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 CHDHQ8NE62 594 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 ZNF566Q969W8 418 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 RPL10LQ96L21 214 aaKnown RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 PPM1MQ96MI6 270 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ACTL8Q9H568 366 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 TLR8Q9NR97 1041 aaKnown RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 EIF2B4Q9UI10 523 aaKnown RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 USP22Q9UPT9 525 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 SNX5Q9Y5X3 404 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 NCF1BA6NI72 391 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 NCF1CA8MVU1 366 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 H7C0S8 307 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 K7EPI3 171 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 SERPINB7O75635 380 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 OTCP00480 354 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 RETP07949 1114 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 TFPTP0C1Z6 253 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 NCF1P14598 390 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 TCF3P15923 654 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 AKT1P31749 480 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 HK3P52790 923 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 TPD52P55327 224 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 IL31Q6EBC2 164 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 NEK10Q6ZWH5 1172 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ADAMTSL2Q86TH1 951 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ANKRD13BQ86YJ7 626 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 PIK3C3Q8NEB9 887 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ZNF548Q8NEK5 533 aaPredicted RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 METTL6Q8TCB7 284 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 SLC22A17Q8WUG5 538 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 FKBP10Q96AY3 582 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 LINGO1Q96FE5 620 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 WDR12Q9GZL7 423 aaKnown RBP17.45■□□□□ 0.38
RTN4-204ENST00000357732 HMG20AQ9NP66 347 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 ENPP5Q9UJA9 477 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 PCDHGA8Q9Y5G5 932 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 CHD5Q8TDI0 1954 aa17.45■□□□□ 0.38
RTN4-204ENST00000357732 SCN10AQ9Y5Y9 1956 aa17.44■□□□□ 0.38
RTN4-204ENST00000357732 BOLA2-SMG1P6H3BVE0 249 aa17.44■□□□□ 0.38
RTN4-204ENST00000357732 ENPP3O14638 875 aa17.44■□□□□ 0.38
RTN4-204ENST00000357732 CCDC159P0C7I6 412 aa17.44■□□□□ 0.38
RTN4-204ENST00000357732 G6PDP11413 515 aa17.44■□□□□ 0.38
RTN4-204ENST00000357732 NFKBIAP25963 317 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms