RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 EGLN2Q96KS0 407 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 ADAM2Q99965 735 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 ZNF304Q9HCX3 659 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 THG1LQ9NWX6 298 aaKnown RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 UXTQ9UBK9 157 aaPredicted RBP9.27□□□□□ -0.93
SMG6-202ENST00000354901 AASSQ9UDR5 926 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 PADI3Q9ULW8 664 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 POLHQ9Y253 713 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 TSC2P49815 1807 aa9.27□□□□□ -0.93
SMG6-202ENST00000354901 KPNA6O60684 536 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CAPGP40121 348 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CDKN2DP55273 166 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 SNRPD2P62316 118 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 TAF1CQ15572 869 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 CDONQ4KMG0 1287 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TECRLQ5HYJ1 363 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 REP15Q6BDI9 236 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 PPP4R4Q6NUP7 873 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CCBE1Q6UXH8 406 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 TMEM126BQ8IUX1 230 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 LSMEM1Q8N8F7 131 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 FAR1Q8WVX9 515 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ZNF641Q96N77 438 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 KATNAL1Q9BW62 490 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ALOXE3Q9BYJ1 711 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ZNF385DQ9H6B1 395 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CSNK1G1Q9HCP0 422 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ABCC13Q9NSE7 274 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TREX1Q9NSU2 369 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ZMAT5Q9UDW3 170 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 UBA6A0AVT1 1052 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 FAM172BPA6NC97 362 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CENPBD1B2RD01 187 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 hCG_2039718K7EN88 272 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 NR5A2O00482 541 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TADA2AO75478 443 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 PSMA4P25789 261 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 SHMT2P34897 504 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ADRA1AP35348 466 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 HK2P52789 917 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TMBIM6P55061 237 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 POU4F1Q01851 419 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 IHHQ14623 411 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 MEP1AQ16819 746 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ATAD3CQ5T2N8 411 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 PIK3R6Q5UE93 754 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 MARC1Q5VT66 337 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 KIAA0930Q6ICG6 404 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 TAF2Q6P1X5 1199 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TUBA3EQ6PEY2 450 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 C17orf99Q6UX52 265 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 HID1Q8IV36 788 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 JPH3Q8WXH2 748 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 C3orf30Q96M34 536 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TSGA13Q96PP4 275 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 KCNA7Q96RP8 456 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 KCTD14Q9BQ13 255 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 ACBD6Q9BR61 282 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TDRD1Q9BXT4 1180 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 B3GNT4Q9C0J1 378 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TRMT13Q9NUP7 481 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 CACNA2D2Q9NY47 1150 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 SMPD3Q9NY59 655 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 BTRCQ9Y297 605 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 RWDD3Q9Y3V2 267 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ACTL7AQ9Y615 435 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 NCF1BA6NI72 391 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 NCF1CA8MVU1 366 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 UBFD1O14562 309 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 CYP7B1O75881 506 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 NCF1P14598 390 aaPredicted RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 CHRM3P20309 590 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 UQCRC1P31930 480 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 RPS9P46781 194 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 POLD2P49005 469 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 KPNA2P52292 529 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 EIF2B5Q13144 721 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 FRG1Q14331 258 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 GALNT3Q14435 633 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CCNYL2Q5T2Q4 361 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ZNF773Q6PK81 442 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 SCIMPQ6UWF3 145 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TMEM207Q6UWW9 146 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ERMP1Q7Z2K6 904 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 STK32CQ86UX6 486 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 IFNL1Q8IU54 200 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 CMTR2Q8IYT2 770 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TTC9BQ8N6N2 239 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 PROX1Q92786 737 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 ZUFSPQ96AP4 578 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 VMP1Q96GC9 406 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 NSUN5Q96P11 429 aaKnown RBP9.26□□□□□ -0.93
SMG6-202ENST00000354901 NARFLQ9H6Q4 476 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 SPAG4Q9NPE6 437 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 RGS18Q9NS28 235 aa9.26□□□□□ -0.93
SMG6-202ENST00000354901 TMEM9Q9P0T7 183 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms