RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 PHTF2Q8N3S3 785 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 TP53I13Q8NBR0 393 aaPredicted RBP10.71□□□□□ -0.69
SND1-201ENST00000354725 C3orf58Q8NDZ4 430 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 DEPDC1BQ8WUY9 529 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 HTR3CQ8WXA8 447 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 ZNF668Q96K58 619 aaPredicted RBP10.71□□□□□ -0.69
SND1-201ENST00000354725 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.69
SND1-201ENST00000354725 MAGEB5Q9BZ81 275 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 CPNE5Q9HCH3 593 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 ZC4H2Q9NQZ6 224 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 OLAHQ9NV23 265 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 PNPOQ9NVS9 261 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 TMEM216Q9P0N5 145 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 MBD1Q9UIS9 605 aaPredicted RBP10.71□□□□□ -0.69
SND1-201ENST00000354725 FZD10Q9ULW2 581 aa10.71□□□□□ -0.69
SND1-201ENST00000354725 A0A087WXM4 84 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 J3KRW8 73 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 TTKP33981 857 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.7
SND1-201ENST00000354725 PSMD8P48556 350 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 RPL10AP62906 217 aaKnown RBP10.71□□□□□ -0.7
SND1-201ENST00000354725 TXNL4AP83876 142 aaKnown RBP10.71□□□□□ -0.7
SND1-201ENST00000354725 NME3Q13232 169 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 ESCO2Q56NI9 601 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 C16orf59Q7L2K0 433 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 FAM124AQ86V42 546 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 ARMC8Q8IUR7 673 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 PDPRQ8NCN5 879 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 CMTM5Q96DZ9 223 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 SLC47A1Q96FL8 570 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 TNIP3Q96KP6 325 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 ZNF229Q9UJW7 825 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 TRHDEQ9UKU6 1024 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 MFHAS1Q9Y4C4 1052 aa10.71□□□□□ -0.7
SND1-201ENST00000354725 NCF1BA6NI72 391 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 NCF1CA8MVU1 366 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 FAM25AB3EWG3 89 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 FAM25CB3EWG5 89 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 FAM25GB3EWG6 89 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 TARM1B6A8C7 271 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CCNKO75909 580 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 SBK3P0C264 359 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CKBP12277 381 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 VAMP1P23763 118 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 SDC4P31431 198 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 PAFAH1B3Q15102 231 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 PDPK2PQ6A1A2 396 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 OR6B2Q6IFH4 312 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 SULT1C3Q6IMI6 304 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 C16orf46Q6P387 395 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 MEX3BQ6ZN04 569 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 DENND5BQ6ZUT9 1274 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 NRSN1Q8IZ57 195 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 EID3Q8N140 333 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CCDC185Q8N715 623 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 ZFYVE19Q96K21 471 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 RBBP8Q99708 897 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 GAL3ST1Q99999 423 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 C1QTNF1Q9BXJ1 281 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 NAA50Q9GZZ1 169 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 EPS8L2Q9H6S3 715 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 C8orf33Q9H7E9 229 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 HMG20AQ9NP66 347 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 PKD2L2Q9NZM6 624 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 RIMS3Q9UJD0 308 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ZMIZ1Q9ULJ6 1067 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 PTPRDP23468 1912 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ZCWPW2A0A1B0GU75 182 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 OR6C65A6NJZ3 312 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 TIMP1P01033 207 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ARF4P18085 180 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 GRIK1P39086 918 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 EPHB1P54762 984 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CLCQ05315 142 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 SCRN3Q0VDG4 424 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 GALNT3Q14435 633 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 TMEM132DQ14C87 1099 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 MLC1Q15049 377 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 SOWAHAQ2M3V2 549 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 SIX6OS1Q8N1H7 587 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 OR8K3Q8NH51 312 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 LRRN4Q8WUT4 740 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 AHCYL2Q96HN2 611 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 FCRL3Q96P31 734 aaPredicted RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 CPNE1Q99829 537 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 APOL6Q9BWW8 343 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 WDR12Q9GZL7 423 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 PNPLA3Q9NST1 481 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.78e-9■■■■□ 25.1
SND1-201ENST00000354725 PRPF19Q9UMS4 504 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 TSPAN4O14817 238 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 SCAMP2O15127 329 aaKnown RBP10.7□□□□□ -0.7
SND1-201ENST00000354725 EOMESO95936 686 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 KRT19P08727 400 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 CD1EP15812 388 aa10.7□□□□□ -0.7
SND1-201ENST00000354725 PCSK2P16519 638 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms