RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 XIAPP98170 497 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 DLX2Q07687 328 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 LMAN2Q12907 356 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 NFATC3Q12968 1075 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 NDUFA5Q16718 116 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 LSM12Q3MHD2 195 aaKnown RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 KCTD8Q6ZWB6 473 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF557Q8N988 423 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 SPATA22Q8NHS9 363 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 PSMA8Q8TAA3 256 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 SGCDQ92629 289 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 FBXL20Q96IG2 436 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 NECTIN4Q96NY8 510 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 PLAC1Q9HBJ0 212 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 NT5MQ9NPB1 228 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 SENP1Q9P0U3 644 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 CR2P20023 1033 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 ELK3P41970 407 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 PTPN5P54829 565 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 ZBED5Q49AG3 693 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 PDPK2PQ6A1A2 396 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 LAYNQ6UX15 382 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 LENG8Q96PV6 779 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 APOL5Q9BWW9 433 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 PLK2Q9NYY3 685 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 MAT2BQ9NZL9 334 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 SEPT3Q9UH03 358 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 RIMS3Q9UJD0 308 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 INTS6Q9UL03 887 aaKnown RBP9.99□□□□□ -0.81
SYNE1-203ENST00000354674 ACTL7AQ9Y615 435 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 WNT6Q9Y6F9 365 aa9.99□□□□□ -0.81
SYNE1-203ENST00000354674 SZT2Q5T011 3432 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TIPRLO75663 272 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 MT-CYBP00156 380 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 PGRP06401 933 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 SERPINA6P08185 405 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 INHBBP09529 407 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CD70P32970 193 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 VIPR2P41587 438 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ECT2LQ008S8 904 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 OXA1LQ15070 435 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CDONQ4KMG0 1287 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ATAT1Q5SQI0 421 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ASTLQ6HA08 431 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 DENND5AQ6IQ26 1287 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 RANBP10Q6VN20 620 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 LINC00523Q86TU6 105 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ZNF354CQ86Y25 554 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CCDC117Q8IWD4 279 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 APCDD1Q8J025 514 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 PCDH20Q8N6Y1 951 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 BPIFB1Q8TDL5 484 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ZFP90Q8TF47 636 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 JADE3Q92613 823 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 MRGPRX2Q96LB1 330 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 SPON2Q9BUD6 331 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 POLR1EQ9GZS1 481 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ARNT2Q9HBZ2 717 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 THAP1Q9NVV9 213 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CBX4O00257 560 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 KMOO15229 486 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 SNAP91O60641 907 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 JRKO75564 520 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TYRP14679 529 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CCNA2P20248 432 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 HLA-FP30511 346 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 SERPINB1P30740 379 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 P2RX3P56373 397 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 PLEKHG6Q3KR16 790 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 LY6G5CQ5SRR4 150 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TTC23LQ6PF05 361 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 SNX32Q86XE0 403 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CHERPQ8IWX8 916 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ASIC4Q96FT7 647 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 RPL10LQ96L21 214 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 EBNA1BP2Q99848 306 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 FAM83CQ9BQN1 747 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 HOXD1Q9GZZ0 328 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 DUS2Q9NX74 493 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 C6orf203Q9P0P8 240 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 GMPR2Q9P2T1 348 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 VPS28Q9UK41 221 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 COL4A3Q01955 1670 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
SYNE1-203ENST00000354674 SDR42E2A6NKP2 422 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 TM9SF1O15321 606 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ZBTB14O43829 449 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 MT-ND1P03886 318 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CPA3P15088 417 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 ETV4P43268 484 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 IL1RL1Q01638 556 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 DSC2Q02487 901 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 FCHO2Q0JRZ9 810 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 OLIG2Q13516 323 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 DHCR24Q15392 516 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 STEAP4Q687X5 459 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 CES5AQ6NT32 575 aa9.98□□□□□ -0.81
SYNE1-203ENST00000354674 PGM2L1Q6PCE3 622 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms