RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 TFEBP19484 476 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 UGT1A1P22309 533 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 UGT1A4P22310 534 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 HOXA9P31269 272 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 UGT1A3P35503 534 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 UGT1A5P35504 534 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 PLK1P53350 603 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 ARMC12Q5T9G4 340 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 SLC29A1Q99808 456 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 AARSD1Q9BTE6 412 aaKnown RBP18.4■□□□□ 0.54
SPNS1-204ENST00000352260 WDR55Q9H6Y2 383 aaPredicted RBP18.4■□□□□ 0.54
SPNS1-204ENST00000352260 FKBPLQ9UIM3 349 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 SNX13Q9Y5W8 968 aa18.4■□□□□ 0.54
SPNS1-204ENST00000352260 CHRNGP07510 517 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 HOXB8P17481 243 aaPredicted RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CCR10P46092 362 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CSNK1DP48730 415 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 NAGLUP54802 743 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 TMBIM6P55061 237 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 NTHL1P78549 312 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 MTX3Q5HYI7 312 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 SAMD4BQ5PRF9 694 aaKnown RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 C9orf50Q5SZB4 431 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 NANOGP8Q6NSW7 305 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 ERMP1Q7Z2K6 904 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 TXNDC5Q8NBS9 432 aaKnown RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 SLCO4A1Q96BD0 722 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CGREF1Q99674 301 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 MAGEE1Q9HCI5 957 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 BPIFA1Q9NP55 256 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 ADA2Q9NZK5 511 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 A0A0U1RQS6 177 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 KPNA4O00629 521 aaPredicted RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 STX7O15400 261 aaKnown RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CNOT3O75175 753 aaKnown RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 PIGNO95427 931 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CTPS1P17812 591 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 ATP5F1P24539 256 aaPredicted RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 MPSTP25325 297 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 SLC26A3P40879 764 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CTSOP43234 321 aaPredicted RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 SUOXP51687 545 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CTBSQ01459 385 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 PITRM1Q5JRX3 1037 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CHSY3Q70JA7 882 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 TMEM25Q86YD3 366 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 GRIN3AQ8TCU5 1115 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 PIH1D2Q8WWB5 315 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 LPGAT1Q92604 370 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 ZUFSPQ96AP4 578 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 DCUN1D5Q9BTE7 237 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 SPAG4Q9NPE6 437 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CD300AQ9UGN4 299 aa18.39■□□□□ 0.53
SPNS1-204ENST00000352260 CNOT6Q9ULM6 557 aaKnown RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 COPG1Q9Y678 874 aaKnown RBP18.39■□□□□ 0.53
SPNS1-204ENST00000352260 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.38■□□□□ 0.53
SPNS1-204ENST00000352260 CFAP99D6REC4 459 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 PRAMEF12O95522 483 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 RBP1P09455 135 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 HNRNPA1P09651 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
SPNS1-204ENST00000352260 S100A1P23297 94 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 HLA-FP30511 346 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 MC4RP32245 332 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 MSX2P35548 267 aaPredicted RBP18.38■□□□□ 0.53
SPNS1-204ENST00000352260 CDKN1CP49918 316 aaPredicted RBP18.38■□□□□ 0.53
SPNS1-204ENST00000352260 DNAJB13P59910 316 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 ACAP2Q15057 778 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 SHHQ15465 462 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 PRSS36Q5K4E3 855 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 ANKRD26P1Q6NSI1 321 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 METTL3Q86U44 580 aaKnown RBP18.38■□□□□ 0.53
SPNS1-204ENST00000352260 SEMA6AQ9H2E6 1030 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
SPNS1-204ENST00000352260 TNKS2Q9H2K2 1166 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 TDP1Q9NUW8 608 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 CDC14AQ9UNH5 594 aa18.38■□□□□ 0.53
SPNS1-204ENST00000352260 UBA6A0AVT1 1052 aaPredicted RBP18.37■□□□□ 0.53
SPNS1-204ENST00000352260 NEMP2A6NFY4 417 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 XYLBO75191 536 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 IGSF6O95976 241 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 ALPIP09923 528 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 FUT4P22083 530 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 GKP32189 559 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 MAPK8P45983 427 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 CDH15P55291 814 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 PRKCQQ04759 706 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 BCL2L1Q07817 233 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 TUBA3CQ13748 450 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 FUT11Q495W5 492 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 ARL13AQ5H913 290 aaPredicted RBP18.37■□□□□ 0.53
SPNS1-204ENST00000352260 DGKKQ5KSL6 1271 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 ASTLQ6HA08 431 aaPredicted RBP18.37■□□□□ 0.53
SPNS1-204ENST00000352260 HMBOX1Q6NT76 420 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 LINC00299Q6ZSB3 139 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 LSMEM2Q8N112 164 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 ZNF786Q8N393 782 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 RNF148Q8N7C7 305 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 LEMD2Q8NC56 503 aa18.37■□□□□ 0.53
SPNS1-204ENST00000352260 FAR2Q96K12 515 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms