RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 ZC4H2Q9NQZ6 224 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 MRPL11Q9Y3B7 192 aaKnown RBP13.09□□□□□ -0.31
IFT88-202ENST00000351808 KCNE2Q9Y6J6 123 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 U3KQV3 271 aa13.09□□□□□ -0.31
IFT88-202ENST00000351808 ASPDHA6ND91 283 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 KCNK1O00180 336 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 TULP3O75386 442 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 IPO13O94829 963 aaKnown RBP13.08□□□□□ -0.32
IFT88-202ENST00000351808 EGFRP00533 1210 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 EDN1P05305 212 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 HTR1EP28566 365 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 MAGEA11P43364 429 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CBX5P45973 191 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 ALDH6A1Q02252 535 aaKnown RBP13.08□□□□□ -0.32
IFT88-202ENST00000351808 ZMYND11Q15326 602 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 PTCHD3Q3KNS1 767 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 TRIM60Q495X7 471 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CEP19Q96LK0 163 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 TEX37Q96LM6 180 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 ITPAQ9BY32 194 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 SLC52A3Q9NQ40 469 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 MUTYHQ9UIF7 546 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 PCDHGB2Q9Y5G2 931 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 SNX8Q9Y5X2 465 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 FAM95CA0A1B0GW59 222 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 DDTLA6NHG4 134 aaPredicted RBP13.08□□□□□ -0.32
IFT88-202ENST00000351808 K7ERI5 159 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 MDM4O15151 490 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 FAM20BO75063 409 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 UGT2B17O75795 530 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 SUPT7LO94864 414 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 GOT1P17174 413 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 JUNDP17535 347 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CA5AP35218 305 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CTSKP43235 329 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 RPS5P46782 204 aaKnown RBP13.08□□□□□ -0.32
IFT88-202ENST00000351808 UGT2B15P54855 530 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CDH13P55290 713 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 TAS2R39P59534 338 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 NKG7Q16617 165 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 ENPP6Q6UWR7 440 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 ARHGAP36Q6ZRI8 547 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 CREB3L2Q70SY1 520 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 TBCBQ99426 244 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 DNAJB9Q9UBS3 223 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
IFT88-202ENST00000351808 A0A1W2PP18 115 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 SMLR1H3BR10 107 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 MFSD11O43934 449 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 ACSL4O60488 711 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 RAD17O75943 681 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 CLEC2LP0C7M8 214 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 AZGP1P25311 298 aaKnown RBP13.07□□□□□ -0.32
IFT88-202ENST00000351808 PRIM2P49643 509 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 DIO3P55073 304 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 SRP54P61011 504 aaKnown RBP13.07□□□□□ -0.32
IFT88-202ENST00000351808 SPATS1Q496A3 300 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 ZMAT1Q5H9K5 638 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 SLFN12LQ6IEE8 588 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 ARSKQ6UWY0 536 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 AHSA2Q719I0 299 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 OR8H1Q8NGG4 311 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
IFT88-202ENST00000351808 CCDC32Q9BV29 185 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 UGT2B28Q9BY64 529 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 M0R082 166 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 PPP6CO00743 305 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 TOR1AO14656 332 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 SLC16A6O15403 523 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 SERPINI2O75830 405 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 PFKLP17858 780 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 CSTF2P33240 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
IFT88-202ENST00000351808 PTGER2P43116 358 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
IFT88-202ENST00000351808 GBX1Q14549 363 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 LAMTOR1Q6IAA8 161 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 FAM171BQ6P995 826 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 TP53INP2Q8IXH6 220 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 TMEM143Q96AN5 459 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 GIMAP5Q96F15 307 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 PDLIM5Q96HC4 596 aaKnown RBP13.07□□□□□ -0.32
IFT88-202ENST00000351808 SLC30A2Q9BRI3 323 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 GSTO2Q9H4Y5 243 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 TMEFF2Q9UIK5 374 aaPredicted RBP13.07□□□□□ -0.32
IFT88-202ENST00000351808 DNAJC15Q9Y5T4 150 aa13.07□□□□□ -0.32
IFT88-202ENST00000351808 A0A0B4J293 547 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 C1RP00736 705 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 PGRP06401 933 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 HGFP14210 728 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 ZNF30P17039 623 aa13.06□□□□□ -0.32
IFT88-202ENST00000351808 MVKQ03426 396 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms