RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 SASH3O75995 380 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 LMNAP02545 664 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 ITGA2BP08514 1039 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 ZNF806P0C7X5 589 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 GPR89BP0CG08 455 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 KELP23276 732 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 DGKAP23743 735 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 AOAHP28039 575 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 HTR1BP28222 390 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 MAGEA12P43365 314 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 ARHGAP8P85298 464 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PPARDQ03181 441 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 DMPKQ09013 629 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PTK2BQ14289 1009 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 TEAD4Q15561 434 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 ZKSCAN8Q15776 578 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PRRT3Q5FWE3 981 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 CHST15Q7LFX5 561 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 GATAD2AQ86YP4 633 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 GPATCH11Q8N954 259 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 ANKRD49Q8WVL7 239 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 PATE1Q8WXA2 126 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 RMDN2Q96LZ7 410 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 NRTNQ99748 197 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 CCM2Q9BSQ5 444 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 RMI1Q9H9A7 625 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 RAB23Q9ULC3 237 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 GPR34Q9UPC5 381 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 RUVBL2Q9Y230 463 aaKnown RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 GPSM3Q9Y4H4 160 aa12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 COL27A1Q8IZC6 1860 aaPredicted RBP12.5□□□□□ -0.41
ERGIC3-202ENST00000348547 FRYQ5TBA9 3013 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 MGAT4DA6NG13 374 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 AGPSO00116 658 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 KMOO15229 486 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 CASC3O15234 703 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 GPC4O75487 556 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SNRNP200O75643 2136 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 RFPL1O75677 317 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 TRIM16O95361 564 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SLC35E2BP0CK96 405 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 EPHA8P29322 1005 aaPredicted RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 DLG1Q12959 904 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 CASP8Q14790 479 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 KLHL38Q2WGJ6 581 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 ACSBG2Q5FVE4 666 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 PPM1JQ5JR12 505 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 MROH9Q5TGP6 573 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 PTRHD1Q6GMV3 140 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SLC30A9Q6PML9 568 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SH2D5Q6ZV89 423 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 RASGRP3Q8IV61 690 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SAP25Q8TEE9 199 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 KCNJ9Q92806 393 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 ISL2Q96A47 359 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 TMEM109Q9BVC6 243 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 ZCCHC2Q9C0B9 1178 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 COG4Q9H9E3 785 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 PRDM8Q9NQV8 689 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 KLC4Q9NSK0 619 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 TRNAU1APQ9NX07 287 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 FETUBQ9UGM5 382 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 GNPTGQ9UJJ9 305 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 TSR3Q9UJK0 312 aaKnown RBP12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 ZNF180Q9UJW8 692 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 SLC39A10Q9ULF5 831 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 BTBD3Q9Y2F9 522 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 PCDHB1Q9Y5F3 818 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
ERGIC3-202ENST00000348547 LY6G6EA0A0G2JKS1 128 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 H3BMM5 538 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 TRIM38O00635 465 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 YY2O15391 372 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 GDF9O60383 454 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 RALBP11234 206 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 MYF5P13349 255 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 IRF9Q00978 393 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 BOP1Q14137 746 aaKnown RBP12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 MAP9Q49MG5 647 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 GRTP1Q5TC63 336 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 METRNLQ641Q3 311 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 DUS1LQ6P1R4 473 aaKnown RBP12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 PAQR3Q6TCH7 311 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 TDRPQ86YL5 185 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 CPNE9Q8IYJ1 553 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 MINDY1Q8N5J2 469 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 CDKL2Q92772 493 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 ELMO2Q96JJ3 720 aa12.48□□□□□ -0.41
ERGIC3-202ENST00000348547 GTPBP2Q9BX10 602 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms