RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MPP2Q14168 576 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 PTK2BQ14289 1009 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 NAPRTQ6XQN6 538 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 TBC1D1Q86TI0 1168 aaPredicted RBP26.6■■□□□ 1.85
SSBP4-202ENST00000348495 DCP2Q8IU60 420 aaKnown RBP26.6■■□□□ 1.85
SSBP4-202ENST00000348495 KCTD4Q8WVF5 259 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 ELMO1Q92556 727 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 GPR78Q96P69 363 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 DCDC2Q9UHG0 476 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 SMG5Q9UPR3 1016 aaKnown RBP26.6■■□□□ 1.85
SSBP4-202ENST00000348495 CDYLQ9Y232 598 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 TNRC6BQ9UPQ9 1833 aaKnown RBP26.6■■□□□ 1.85
SSBP4-202ENST00000348495 SPTY2D1-AS1A0A0U1RR47 76 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 KMOO15229 486 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 GPC4O75487 556 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 KLHL2O95198 593 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 GSTA1P08263 222 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 ITPKAP23677 461 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 HPDP32754 393 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-202ENST00000348495 CCT5P48643 541 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 INSCQ1MX18 579 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 TTLL9Q3SXZ7 439 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 PLEKHS1Q5SXH7 462 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 LYSMD4Q5XG99 296 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 OR2L2Q8NH16 312 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 PDXPQ96GD0 296 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 PDLIM5Q96HC4 596 aaKnown RBP26.59■■□□□ 1.85
SSBP4-202ENST00000348495 TM7SF3Q9NS93 570 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 ZNF358Q9NW07 568 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 SLC23A2Q9UGH3 650 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 ZNHIT2Q9UHR6 403 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 PCDHGA2Q9Y5H1 932 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 MGAT4DA6NG13 374 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 GALR2O43603 387 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-202ENST00000348495 SLC18A1P54219 525 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 IL2P60568 153 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 ARHGAP8P85298 464 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 FZD2Q14332 565 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 ACSBG2Q5FVE4 666 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 RGL4Q8IZJ4 473 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 SPATA6LQ8N4H0 392 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 NKAPQ8N5F7 415 aaKnown RBP26.59■■□□□ 1.85
SSBP4-202ENST00000348495 EEF1AKMT1Q8WVE0 214 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 KLQ9UEF7 1012 aa26.59■■□□□ 1.85
SSBP4-202ENST00000348495 SLC5A10A0PJK1 596 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 GLRA3O75311 464 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 SLCO2B1O94956 709 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 LTA4HP09960 611 aaKnown RBP26.58■■□□□ 1.85
SSBP4-202ENST00000348495 DHPSP49366 369 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-202ENST00000348495 BOP1Q14137 746 aaKnown RBP26.58■■□□□ 1.85
SSBP4-202ENST00000348495 CSHL1Q14406 222 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 ALG11Q2TAA5 492 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 GALNT13Q8IUC8 556 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 ASZ1Q8WWH4 475 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 NXNL1Q96CM4 212 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 DERL2Q9GZP9 239 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 CYP4F12Q9HCS2 524 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 DGKBQ9Y6T7 804 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 LRP4O75096 1905 aa26.58■■□□□ 1.85
SSBP4-202ENST00000348495 TMEM120BA0PK00 339 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 KLHL33A6NCF5 533 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 EIF3FO00303 357 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-202ENST00000348495 APOA4P06727 396 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 CBSLP0DN79 551 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 NR1D1P20393 614 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 DGKAP23743 735 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 PBLDP30039 288 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-202ENST00000348495 RPA3P35244 121 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-202ENST00000348495 CBSP35520 551 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 SRP54P61011 504 aaKnown RBP26.57■■□□□ 1.84
SSBP4-202ENST00000348495 PPP2R2AP63151 447 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 HSPA14Q0VDF9 509 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 PLA2G4EQ3MJ16 856 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 LAYNQ6UX15 382 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 AMZ2Q86W34 360 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 LILRA3Q8N6C8 439 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-202ENST00000348495 HM13Q8TCT9 377 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 TSACCQ96A04 125 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-202ENST00000348495 LINGO1Q96FE5 620 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 TIMM29Q9BSF4 260 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 PLLPQ9Y342 182 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 ZNF318Q5VUA4 2279 aa26.57■■□□□ 1.84
SSBP4-202ENST00000348495 SPAG17Q6Q759 2223 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 PRR19A6NJB7 356 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 TLR4O00206 839 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 LIN7AO14910 233 aaPredicted RBP26.56■■□□□ 1.84
SSBP4-202ENST00000348495 BCAT2O15382 392 aaPredicted RBP26.56■■□□□ 1.84
SSBP4-202ENST00000348495 CD1DP15813 335 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 OAS2P29728 719 aaKnown RBP26.56■■□□□ 1.84
SSBP4-202ENST00000348495 GNPDA1P46926 289 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 EIF2B5Q13144 721 aaKnown RBP26.56■■□□□ 1.84
SSBP4-202ENST00000348495 FAM83EQ2M2I3 478 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 VRK3Q8IV63 474 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 TCP10LQ8TDR4 215 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 COG4Q9H9E3 785 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 CARS2Q9HA77 564 aaKnown RBP26.56■■□□□ 1.84
SSBP4-202ENST00000348495 KCNK9Q9NPC2 374 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 TMEM216Q9P0N5 145 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 MOSPD1Q9UJG1 213 aa26.56■■□□□ 1.84
SSBP4-202ENST00000348495 EMCNQ9ULC0 261 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms