RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 ABRAXAS2Q15018 415 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 GPR141Q7Z602 305 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 ZNF513Q8N8E2 541 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 OR4F6Q8NGB9 312 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 C12orf43Q96C57 262 aaKnown RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 CD320Q9NPF0 282 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 NUDT4Q9NZJ9 180 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 ZNF840PA6NDX5 716 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 UMPSP11172 480 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 RPL17P18621 184 aaKnown RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 ADARP55265 1226 aaKnown RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 NAA20P61599 178 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 RFTN2Q52LD8 501 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 CYP20A1Q6UW02 462 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 PATL1Q86TB9 770 aaKnown RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 RIC8BQ9NVN3 520 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 POLR3HQ9Y535 204 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 PCDHB3Q9Y5E6 796 aa14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 MAGED1Q9Y5V3 778 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF1-202ENST00000347545 TYW5A2RUC4 315 aaKnown RBP14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 STX7O15400 261 aaKnown RBP14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 TAPBPO15533 448 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 ATE1O95260 518 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 LDLRP01130 860 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 IMPDH2P12268 514 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 POLR2IP36954 125 aaKnown RBP14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 TRAF3Q13114 568 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PCBP2Q15366 365 aaKnown RBP eCLIP14.32□□□□□ -0.122e-8■■■■■ 84.1
ARHGEF1-202ENST00000347545 GLYATQ6IB77 296 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 IL27RAQ6UWB1 636 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 CHST15Q7LFX5 561 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 DHRSXQ8N5I4 330 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 FAM86B1Q8N7N1 296 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 RNF145Q96MT1 663 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 RNF38Q9H0F5 515 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 IL17CQ9P0M4 197 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 SUN2Q9UH99 717 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 VPS9D1Q9Y2B5 631 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 TDRKHQ9Y2W6 561 aaKnown RBP14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PLXNB3Q9ULL4 1909 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 FZD6O60353 706 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 HNRNPCP07910 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PTGER3P43115 390 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PRKG2Q13237 762 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PLCL1Q15111 1095 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 NKG7Q16617 165 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 TAS2R42Q7RTR8 314 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 BOCQ9BWV1 1114 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 DHRS7Q9Y394 339 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 PCDHGA11Q9Y5H2 935 aa14.32□□□□□ -0.12
ARHGEF1-202ENST00000347545 OBSL1O75147 1896 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 SCN5AQ14524 2016 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 E5RI56 91 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 SCAMP3O14828 347 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 NBNO60934 754 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 KATNA1O75449 491 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 PRSS23O95084 383 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ESR1P03372 595 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ALPIP09923 528 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 HMGA1P17096 107 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 MZF1P28698 734 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 SHMT2P34897 504 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 PLIN5Q00G26 463 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 MTA1Q13330 715 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 DCTN2Q13561 401 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 TMEM214Q6NUQ4 689 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 PROSER1Q86XN7 944 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 PDPRQ8NCN5 879 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 METTL6Q8TCB7 284 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ADGRE3Q9BY15 652 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 NAA50Q9GZZ1 169 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 RETREG1Q9H6L5 497 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 CWH43Q9H720 699 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 C8orf4Q9NR00 106 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ARNTLO00327 626 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 CA12O43570 354 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 NPPAP01160 153 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 IRF1P10914 325 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 CDH1P12830 882 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 CTPS1P17812 591 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ZNF177Q13360 481 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 GTF2H2Q13888 395 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 RAB39AQ14964 217 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ATXN7L2Q5T6C5 722 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 GTF2H2CQ6P1K8 395 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 CHST9Q7L1S5 443 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ITIH5Q86UX2 942 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 PDLIM5Q96HC4 596 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 CGREF1Q99674 301 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 IKZF5Q9H5V7 419 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 NSUN3Q9H649 340 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 TMEM45AQ9NWC5 275 aa14.31□□□□□ -0.12
ARHGEF1-202ENST00000347545 ZNF711Q9Y462 761 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms