RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 CCNHP51946 323 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 PRKAA2P54646 552 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 BST1Q10588 318 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 IFT88Q13099 833 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ILKQ13418 452 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 PTPRCAPQ14761 206 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 MYLK3Q32MK0 819 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ACCSLQ4AC99 568 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF789Q5FWF6 425 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 CCDC121Q6ZUS5 278 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 TBC1D1Q86TI0 1168 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 CEP97Q8IW35 865 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 CENPLQ8N0S6 344 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 EID2Q8N6I1 236 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 PPP1R14CQ8TAE6 165 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 FGF11Q92914 225 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ECHDC3Q96DC8 303 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF641Q96N77 438 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 TRIM55Q9BYV6 548 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 SUDS3Q9H7L9 328 aaPredicted RBP13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 FBXL12Q9NXK8 326 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 IL17CQ9P0M4 197 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 SERGEFQ9UGK8 458 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 PPIL1Q9Y3C6 166 aa13.33□□□□□ -0.27
HERPUD1-202ENST00000344114 CFAP46Q8IYW2 2715 aa13.33□□□□□ -0.28
HERPUD1-202ENST00000344114 ARID1BQ8NFD5 2236 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-202ENST00000344114 TENM4Q6N022 2769 aa13.33□□□□□ -0.28
HERPUD1-202ENST00000344114 SNNO75324 88 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SERPINE1P05121 402 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 FGF3P11487 239 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CPA3P15088 417 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 FDXRP22570 491 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 GRK2P25098 689 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 MC4RP32245 332 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 TTPAP49638 278 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 OCRLQ01968 901 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CFHR1Q03591 330 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 STX3Q13277 289 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SEMA3AQ14563 771 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 LRRC8EQ6NSJ5 796 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 KLC3Q6P597 504 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 KANSL1Q7Z3B3 1105 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 LYSMD3Q7Z3D4 306 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 OR2T34Q8NGX1 318 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 C10orf82Q8WW14 230 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 OLFM1Q99784 485 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 MTG2Q9H4K7 406 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ZDHHC6Q9H6R6 413 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 THAP1Q9NVV9 213 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ZNF358Q9NW07 568 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 FZD4Q9ULV1 537 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 VWA7Q9Y334 891 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 USH1CQ9Y6N9 552 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 A0A1W2PP55 124 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 LRRC72A6NJI9 287 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 WNT9AO14904 365 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 BRINP1O60477 761 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 WISP3O95389 354 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ALPIP09923 528 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 LTA4HP09960 611 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 MYL2P10916 166 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CTPS1P17812 591 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 NFKBIAP25963 317 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 RXRGP48443 463 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CCR5P51681 352 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SUOXP51687 545 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 NXPH1P58417 271 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 TLE3Q04726 772 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CACNG1Q06432 222 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ASPHQ12797 758 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SFSWAPQ12872 951 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 BNIP3Q12983 259 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ZNF460Q14592 562 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CST6Q15828 149 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 FAM83EQ2M2I3 478 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 HNRNPA1L2Q32P51 320 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 AGAP9Q5VTM2 703 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ZYG11AQ6WRX3 759 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 USP45Q70EL2 814 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 TRPM8Q7Z2W7 1104 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 KDM1BQ8NB78 822 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 MRGPRX3Q96LB0 322 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 SMIM14Q96QK8 99 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 NDNQ99608 321 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 AARSD1Q9BTE6 412 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 CCDC68Q9H2F9 335 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 KDM4CQ9H3R0 1056 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ERVMER34-1Q9H9K5 563 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 ZFYVE1Q9HBF4 777 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 GPAMQ9HCL2 828 aa13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 RUVBL2Q9Y230 463 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-202ENST00000344114 COMMD10Q9Y6G5 202 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms