RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZSWIM5Q9P217 1185 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 EXOGQ9Y2C4 368 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TTC26A0AVF1 554 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 C19orf81C9J6K1 198 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ADD1P35611 737 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 RFC3P40938 356 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SLC6A19Q695T7 634 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 NIM1KQ8IY84 436 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SAMD12Q8N8I0 201 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CCNYQ8ND76 341 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PGAP3Q96FM1 320 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SENP6Q9GZR1 1112 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ACTR10Q9NZ32 417 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TNPO3Q9Y5L0 923 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 EN1Q05925 392 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 TAC4Q86UU9 113 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 OR2L5Q8NG80 312 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 FBRSL1Q9HCM7 1045 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 ERVW-1Q9UQF0 538 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 M0R036 132 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 HNF1AP20823 631 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 BMI1P35226 326 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PTPN9P43378 593 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 AFF1P51825 1210 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 KCNJ10P78508 379 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 CBWD6Q4V339 395 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 SH3PXD2AQ5TCZ1 1133 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 DARS2Q6PI48 645 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PLD6Q8N2A8 252 aaKnown RBP3.73□□□□□ -1.81
SYNE2-202ENST00000344113 PCDH10Q9P2E7 1040 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 V9GYS6 101 aa3.73□□□□□ -1.81
SYNE2-202ENST00000344113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MLNP12872 115 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CD72P21854 359 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KELP23276 732 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ARHGAP15Q53QZ3 475 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ADNP2Q6IQ32 1131 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 THAP6Q8TBB0 222 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RAB7BQ96AH8 199 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FAM83CQ9BQN1 747 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CYP3A43Q9HB55 503 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TREM2Q9NZC2 230 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHA11Q9Y5I1 949 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SYNDIG1LA6NDD5 238 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PRPS2P11908 318 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FSHRP23945 695 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 AIMP2Q13155 320 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 EXOC3L2Q2M3D2 409 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 AVPI1Q5T686 147 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RAD9BQ6WBX8 426 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MCCC2Q9HCC0 563 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LATS2Q9NRM7 1088 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 OGDHLQ9ULD0 1010 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CYR61O00622 381 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MTX2O75431 263 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 AP2A1O95782 977 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 IL15P40933 162 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GLRBP48167 497 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PKNOX1P55347 436 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TAS2R39P59534 338 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CRADDP78560 199 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KCNAB2Q13303 367 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GUCA2BQ16661 112 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DNAJC24Q6P3W2 148 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CHMP1BQ7LBR1 199 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LINC00523Q86TU6 105 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ADGRG3Q86Y34 549 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GSX2Q9BZM3 304 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HIPK2Q9H2X6 1198 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 C11orf16Q9NQ32 467 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GRHL1Q9NZI5 618 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KCND2Q9NZV8 630 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TRAPPC4Q9Y296 219 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 NAALAD2Q9Y3Q0 740 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MAGI2Q86UL8 1455 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GDI1P31150 447 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SLC5A3P53794 718 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CYP24A1Q07973 514 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HKDC1Q2TB90 917 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SPDYE7PQ495Y7 208 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SETMARQ53H47 684 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SLC26A11Q86WA9 606 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RBM15Q96T37 977 aaKnown RBP eCLIP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SPANXDQ9BXN6 97 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CPNE7Q9UBL6 633 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ABCA7Q8IZY2 2146 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ARID1BQ8NFD5 2236 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM218A2RU14 115 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FABP12A6NFH5 140 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CNTN5O94779 1100 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FAM86B2P0C5J1 330 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 NFATC3Q12968 1075 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TIGD6Q17RP2 521 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SATL1Q86VE3 508 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 OR13C3Q8NGS6 347 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 BEX2Q9BXY8 128 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CLCA2Q9UQC9 943 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PXDNLA1KZ92 1463 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PRAMEF33A0A0G2JMD5 474 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PRAMEF10O60809 474 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms