RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CYP2A6P11509 494 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 PRDX3P30048 256 aaKnown RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 NAA20P61599 178 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 FASTKQ14296 549 aaKnown RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 SYVN1Q86TM6 617 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 VN1R2Q8NFZ6 395 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 BPIFB1Q8TDL5 484 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 MRPL1Q9BYD6 325 aaKnown RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 VCX3BQ9H321 246 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 SFXN1Q9H9B4 322 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 PCDH12Q9NPG4 1184 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 TIMM22Q9Y584 194 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 PSMD12O00232 456 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 RFXAPO00287 272 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 GUCA1CO95843 209 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 LINC00032P0C843 101 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 XPAP23025 273 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 VIPR1P32241 457 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 ST8SIA6P61647 398 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 B4GALNT1Q00973 533 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 MESP2Q0VG99 397 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 CEACAM7Q14002 265 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 FLOT2Q14254 428 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 MAPRE2Q15555 327 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 DUSP6Q16828 381 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 LRRC36Q1X8D7 754 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 C18orf21Q32NC0 220 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 LPCAT4Q643R3 524 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 SNX31Q8N9S9 440 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 OR56A4Q8NGH8 313 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 GDPD5Q8WTR4 605 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 ASB16Q96NS5 453 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 FAM126AQ9BYI3 521 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 TUBB1Q9H4B7 451 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 LATS2Q9NRM7 1088 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 CCDC167Q9P0B6 97 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 GIMAP2Q9UG22 337 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 ZNF106Q9H2Y7 1883 aaKnown RBP18.31■□□□□ 0.52
HOXA9-201ENST00000343483 UPK3BL1B0FP48 263 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 UPK3BL2E5RIL1 263 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 RAD51BO15315 384 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 FFAR2O15552 330 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 ESRRBO95718 433 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 SRPRAP08240 638 aaKnown RBP18.31■□□□□ 0.52
HOXA9-201ENST00000343483 ZNF30P17039 623 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 XRCC1P18887 633 aaPredicted RBP18.31■□□□□ 0.52
HOXA9-201ENST00000343483 ARL1P40616 181 aaPredicted RBP18.31■□□□□ 0.52
HOXA9-201ENST00000343483 DPP6P42658 865 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 AGKQ53H12 422 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 CAPRIN2Q6IMN6 1127 aaKnown RBP18.31■□□□□ 0.52
HOXA9-201ENST00000343483 GET4Q7L5D6 327 aaPredicted RBP18.31■□□□□ 0.52
HOXA9-201ENST00000343483 DET1Q7L5Y6 550 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 HSD11B1LQ7Z5J1 315 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 DCBLD1Q8N8Z6 715 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 WFIKKN2Q8TEU8 576 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 FGF13Q92913 245 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 ULK4Q96C45 1275 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 KLHL4Q9C0H6 718 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 SLC28A3Q9HAS3 691 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 UNC80Q8N2C7 3258 aa18.31■□□□□ 0.52
HOXA9-201ENST00000343483 EPOPA6NHQ4 379 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ASLP04424 464 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 TIMP2P16035 220 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ME2P23368 584 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 FSHRP23945 695 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 AKT1P31749 480 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 TRIP10Q15642 601 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 TTLL9Q3SXZ7 439 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ZNF805Q5CZA5 627 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 RARS2Q5T160 578 aaKnown RBP18.3■□□□□ 0.52
HOXA9-201ENST00000343483 PPP2R2DQ66LE6 453 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 GPRIN3Q6ZVF9 776 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 DEFB123Q8N688 67 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 RNF148Q8N7C7 305 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 HMGCLL1Q8TB92 370 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 SMARCD2Q92925 531 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 SCAMP4Q969E2 229 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 NXPE3Q969Y0 559 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 TUBGCP3Q96CW5 907 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ZNF576Q9H609 170 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 NSUN3Q9H649 340 aaKnown RBP18.3■□□□□ 0.52
HOXA9-201ENST00000343483 BCAP29Q9UHQ4 241 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ZNF225Q9UK10 706 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 C5orf42Q9H799 3197 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 OTOL1A6NHN0 477 aaPredicted RBP18.3■□□□□ 0.52
HOXA9-201ENST00000343483 NFATC1O95644 943 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ALDOCP09972 364 aaKnown RBP18.3■□□□□ 0.52
HOXA9-201ENST00000343483 PEX2P28328 305 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 MSX2P35548 267 aaPredicted RBP18.3■□□□□ 0.52
HOXA9-201ENST00000343483 ETV3P41162 512 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 SLC6A11P48066 632 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 STX1BP61266 288 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 STX5Q13190 355 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 GRIN2CQ14957 1233 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 GSTA3Q16772 222 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 KIF19Q2TAC6 998 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 MMEL1Q495T6 779 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 Q6ZVL8 140 aa18.3■□□□□ 0.52
HOXA9-201ENST00000343483 PDSS2Q86YH6 399 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms