RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PPP1R3AQ16821 1122 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ANXA8L1Q5VT79 327 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ARMC6Q6NXE6 501 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ERICH5Q6P6B1 374 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CYP20A1Q6UW02 462 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MAMDC4Q6UXC1 1216 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CEP97Q8IW35 865 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 TCAIMQ8N3R3 496 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 NAT16Q8N8M0 369 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 HM13Q8TCT9 377 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PPCDCQ96CD2 204 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 DEFB118Q96PH6 123 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 KCNA7Q96RP8 456 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MTMR10Q9NXD2 777 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ADAMTS6Q9UKP5 1117 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MYH11P35749 1972 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 H3BM21 787 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 BCKDKO14874 412 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ZNF623O75123 536 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 LINGO3P0C6S8 592 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 GM2AP17900 193 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MYL12AP19105 171 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 EFNA1P20827 205 aaPredicted RBP7.1□□□□□ -1.27
VCAN-202ENST00000342785 NSG1P42857 185 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 DGKKQ5KSL6 1271 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ERMP1Q7Z2K6 904 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PACRGLQ8N7B6 248 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 KBTBD8Q8NFY9 601 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CSGALNACT1Q8TDX6 532 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PYCR2Q96C36 320 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 KCNK13Q9HB14 408 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 ACTR3BQ9P1U1 418 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 CORO2BQ9UQ03 480 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 PDE10AQ9Y233 779 aa7.1□□□□□ -1.27
VCAN-202ENST00000342785 MYH13Q9UKX3 1938 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 K7EPI3 171 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 RNASEH2AO75792 299 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 MFN2O95140 757 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 LEPRP48357 1165 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 CYP4F2P78329 520 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CYP4F3Q08477 520 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CRHR2Q13324 411 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 LDLRAP1Q5SW96 308 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CAPN13Q6MZZ7 669 aaPredicted RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 LYSMD3Q7Z3D4 306 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 R3HCC1LQ7Z5L2 792 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 PNPLA1Q8N8W4 532 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 POC5Q8NA72 575 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 OR10T2Q8NGX3 314 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 MRGPRX2Q96LB1 330 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 TMEM74Q96NL1 305 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 SGK2Q9HBY8 427 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 IFT80Q9P2H3 777 aaPredicted RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 DNAJB9Q9UBS3 223 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 VPS4AQ9UN37 437 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PKD1L3Q7Z443 1732 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 NEDD8-MDP1E9PL57 170 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 DAG1Q14118 895 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 KCTD8Q6ZWB6 473 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PAGE2Q7Z2X7 111 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 SLCO6A1Q86UG4 719 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CYP4Z2PQ8N1L4 340 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 MCFD2Q8NI22 146 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ARNTL2Q8WYA1 636 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 IMP4Q96G21 291 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 MYO9BQ13459 2157 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 STK25O00506 426 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CA12O43570 354 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 OR10H3O60404 316 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PRAMEF11O60813 436 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 GNAZP19086 355 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 DNAJB13P59910 316 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 SPIBQ01892 262 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 DEFB115Q30KQ5 88 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 TECRLQ5HYJ1 363 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 RAVER1Q8IY67 606 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 C11orf65Q8NCR3 313 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ACDQ96AP0 544 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 PLD4Q96BZ4 506 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 AP2M1Q96CW1 435 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 NSUN3Q9H649 340 aaKnown RBP7.09□□□□□ -1.27
VCAN-202ENST00000342785 BTBD3Q9Y2F9 522 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 MYH6P13533 1939 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 TCRBV5S1A1TA0A578 114 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CARNS1A5YM72 827 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CYP7B1O75881 506 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CXCL14O95715 111 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ALPIP09923 528 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 GDF5P43026 501 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ARSDP51689 593 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 UFM1P61960 85 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 CCNIQ14094 377 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 GPR33Q49SQ1 333 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ZNF678Q5SXM1 525 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 TLDC1Q6P9B6 456 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 ZNF280BQ86YH2 543 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 EEF1AKMT1Q8WVE0 214 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 RNFT2Q96EX2 444 aa7.09□□□□□ -1.27
VCAN-202ENST00000342785 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms