RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SEMG2Q02383 582 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 ARSIQ5FYB1 569 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 DLK2Q6UY11 383 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 SLC34A3Q8N130 599 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 FCRL4Q96PJ5 515 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 RNPEPL1Q9HAU8 725 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF536O15090 1300 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 IRAK2O43187 625 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 TLX3O43711 291 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-202ENST00000342494 IFNW1P05000 195 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 OGNP20774 298 aaKnown RBP14.83□□□□□ -0.04
UBE3B-202ENST00000342494 DDX6P26196 483 aaKnown RBP eCLIP14.83□□□□□ -0.04
UBE3B-202ENST00000342494 LIMK2P53671 638 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 SNAPC1Q16533 368 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 CTU1Q7Z7A3 348 aaKnown RBP14.83□□□□□ -0.04
UBE3B-202ENST00000342494 SLC38A4Q969I6 547 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 SLC22A18Q96BI1 424 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 ACSS2Q9NR19 701 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 PCDHGA11Q9Y5H2 935 aa14.83□□□□□ -0.04
UBE3B-202ENST00000342494 HAT1O14929 419 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 TP73O15350 636 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 TCEA3O75764 348 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 SASH3O75995 380 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 UROSP10746 265 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GNAZP19086 355 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 AGXTP21549 392 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 NMBRP28336 390 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GHRHRQ02643 423 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 TMPRSS11AQ6ZMR5 421 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 NARS2Q96I59 477 aaKnown RBP14.82□□□□□ -0.04
UBE3B-202ENST00000342494 PIGUQ9H490 435 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GKN1Q9NS71 199 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 SLC45A1Q9Y2W3 748 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 Q9Y3F1 56 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RIIAD1A6NNX1 92 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 DDX3YO15523 660 aaKnown RBP14.82□□□□□ -0.04
UBE3B-202ENST00000342494 TBX18O95935 607 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 SERPINA1P01009 418 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 MNDAP41218 407 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 ARHGAP1Q07960 439 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 UAP1L1Q3KQV9 507 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 PIK3R6Q5UE93 754 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GLYATQ6IB77 296 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RANBP3LQ86VV4 465 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RASGRP3Q8IV61 690 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 TBC1D21Q8IYX1 336 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RNF31Q96EP0 1072 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 EBPLQ9BY08 206 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 SUV39H2Q9H5I1 410 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 MCUBQ9NWR8 336 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 C15orf41Q9Y2V0 281 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GJA1P17302 382 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RBBP4Q09028 425 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 MYBPC3Q14896 1274 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 PPM1JQ5JR12 505 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 FBXO42Q6P3S6 717 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GDPD4Q6W3E5 623 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RALGPS2Q86X27 583 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-202ENST00000342494 GJD3Q8N144 294 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 COX18Q8N8Q8 333 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 C11orf65Q8NCR3 313 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 ERVK-5Q9HDB9 667 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 TLR9Q9NR96 1032 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 PRODHO43272 600 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 SEC24AO95486 1093 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 CCND3P30281 292 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-202ENST00000342494 NRIP1P48552 1158 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 EOGTQ5NDL2 527 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 ADGRF1Q5T601 910 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 CLEC6AQ6EIG7 209 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 RTKNQ9BST9 563 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 PLGRKTQ9HBL7 147 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 ANKHQ9HCJ1 492 aa14.82□□□□□ -0.04
UBE3B-202ENST00000342494 SSNA1O43805 119 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 WFS1O76024 890 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 SLC8B1Q6J4K2 584 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 TSEN15Q8WW01 171 aaKnown RBP14.81□□□□□ -0.04
UBE3B-202ENST00000342494 APOBEC3GQ9HC16 384 aaKnown RBP14.81□□□□□ -0.04
UBE3B-202ENST00000342494 CDC14AQ9UNH5 594 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 TNFRSF21O75509 655 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 TIPRLO75663 272 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 LRRC32Q14392 662 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 PHF19Q5T6S3 580 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 ZYG11AQ6WRX3 759 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 SPATA9Q9BWV2 254 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 PLEKHA1Q9HB21 404 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 PPLO60437 1756 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 PRR5-ARHGAP8B1AHC4 643 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 NDUFS1P28331 727 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 ELF3P78545 371 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-202ENST00000342494 ARHGAP8P85298 464 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 SOWAHAQ2M3V2 549 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 RASSF5Q8WWW0 418 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 FAXDC2Q96IV6 333 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 SUSD3Q96L08 255 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 HAPLN3Q96S86 360 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 PDP1Q9P0J1 537 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-202ENST00000342494 OR4F21O95013 312 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 CLUP10909 449 aa14.81□□□□□ -0.04
UBE3B-202ENST00000342494 TXNDC8Q6A555 127 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms