RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 DCDC1P59894 354 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 GALNT2Q10471 571 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 MYBPC3Q14896 1274 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 NCF4Q15080 339 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 PLCL1Q15111 1095 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 DUS1LQ6P1R4 473 aaKnown RBP15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 IRF2BP2Q7Z5L9 587 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 GALNT16Q8N428 558 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 NEK11Q8NG66 645 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 OR8K5Q8NH50 307 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 LURAP1Q96LR2 239 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 CD180Q99467 661 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 ITGB1BP2Q9UKP3 347 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 BTRCQ9Y297 605 aa15.95■□□□□ 0.14
NECTIN1-202ENST00000340882 VEGFDO43915 354 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 BPIP17213 487 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 CES1P23141 567 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 HALP42357 657 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 PER3P56645 1201 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 TMEM115Q12893 351 aaPredicted RBP15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 DCAF10Q5QP82 559 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 FKBP15Q5T1M5 1219 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 ZNF385CQ66K41 422 aaPredicted RBP15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 TMC3Q7Z5M5 1100 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 FJX1Q86VR8 437 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 TRAPPC5Q8IUR0 188 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 ACTR5Q9H9F9 607 aaPredicted RBP15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 SOHLH2Q9NX45 425 aa15.94■□□□□ 0.14
NECTIN1-202ENST00000340882 OR6C74A6NCV1 312 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 SLC9B1P1A6NJY1 282 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 CA4P22748 312 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 BECN1Q14457 450 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 NFE2L1Q14494 772 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 ATP13A5Q4VNC0 1218 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 BOLA3Q53S33 107 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 NCBP2-AS2Q69YL0 99 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 KLHL35Q6PF15 583 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 RAB43Q86YS6 212 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 ZADH2Q8N4Q0 377 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 GRHL3Q8TE85 626 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 TRIB3Q96RU7 358 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 NRTNQ99748 197 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 AGPAT4Q9NRZ5 378 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 TMEM63CQ9P1W3 806 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 NFKBIL1Q9UBC1 381 aaPredicted RBP15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 MYO1AQ9UBC5 1043 aa15.93■□□□□ 0.14
NECTIN1-202ENST00000340882 TMEM150CB9EJG8 249 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 AURKAO14965 403 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 LDB2O43679 373 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 FTLP02792 175 aaPredicted RBP15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 SNRPB2P08579 225 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 ITGA3P26006 1051 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 CTSCP53634 463 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 SLC25A11Q02978 314 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 HIF1AQ16665 826 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 KRTAP21-3Q3LHN1 58 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 TMTC4Q5T4D3 741 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 PDPK2PQ6A1A2 396 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 LRRC49Q8IUZ0 686 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 CNTD1Q8N815 330 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 INSM2Q96T92 566 aaPredicted RBP15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 BPIFA1Q9NP55 256 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 IMP3Q9NV31 184 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 COPG2Q9UBF2 871 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 NOVA2Q9UNW9 492 aaKnown RBP15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 ZNF711Q9Y462 761 aa15.92■□□□□ 0.14
NECTIN1-202ENST00000340882 GPR39O43194 453 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 CNOT3O75175 753 aaKnown RBP15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 POP7O75817 140 aaKnown RBP15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 ALPPP05187 535 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 MTHFD1P11586 935 aaKnown RBP15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 FERP16591 822 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 POLR2CP19387 275 aaPredicted RBP15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 CCNCP24863 283 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 DMPKQ09013 629 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 PAFAH1B3Q15102 231 aaKnown RBP15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 AMZ2Q86W34 360 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 OOSP2Q86WS3 158 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 RASGEF1AQ8N9B8 481 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 CLEC1AQ8NC01 280 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 BTBD6Q96KE9 485 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 TSGA13Q96PP4 275 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 AMACRQ9UHK6 382 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 SPO11Q9Y5K1 396 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 PCNX1Q96RV3 2341 aa15.91■□□□□ 0.14
NECTIN1-202ENST00000340882 HEATR9A2RTY3 570 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 STSP08842 583 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 CBSLP0DN79 551 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 EDN3P14138 238 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 VCLP18206 1134 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 CYP2A7P20853 494 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 CBSP35520 551 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 ARSEP51690 589 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 SLC10A2Q12908 348 aaPredicted RBP15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 ZBTB17Q13105 803 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 SSPNQ14714 243 aa15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
NECTIN1-202ENST00000340882 ATP13A4Q4VNC1 1196 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms