RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 TGM7Q96PF1 710 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 NRTNQ99748 197 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 EPHA6Q9UF33 1036 aa16.69■□□□□ 0.26
BRCC3-202ENST00000340647 TMEM184BQ9Y519 407 aaPredicted RBP16.69■□□□□ 0.26
BRCC3-202ENST00000340647 CFAP20Q9Y6A4 193 aaKnown RBP16.69■□□□□ 0.26
BRCC3-202ENST00000340647 MAST4O15021 2626 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 MGAT4DA6NG13 374 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 H7C0S8 307 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 AP2A1O95782 977 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 DLGAP3O95886 979 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 ETS1P14921 441 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 LIFP15018 202 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 PBLDP30039 288 aaPredicted RBP16.68■□□□□ 0.26
BRCC3-202ENST00000340647 CETN2P41208 172 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 GRIA1P42261 906 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 TNNT3P45378 269 aaPredicted RBP16.68■□□□□ 0.26
BRCC3-202ENST00000340647 TAF1BQ53T94 588 aaPredicted RBP16.68■□□□□ 0.26
BRCC3-202ENST00000340647 DCAF12Q5T6F0 453 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 CAPRIN2Q6IMN6 1127 aaKnown RBP16.68■□□□□ 0.26
BRCC3-202ENST00000340647 PLXDC1Q8IUK5 500 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 PIANPQ8IYJ0 282 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 OR2L2Q8NH16 312 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 KLHL6Q8WZ60 621 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 RMDN2Q96LZ7 410 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 TTC25Q96NG3 672 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 RAB33BQ9H082 229 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 WWP1Q9H0M0 922 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 MYO18BQ8IUG5 2567 aa16.68■□□□□ 0.26
BRCC3-202ENST00000340647 LOC101059948A0A1B0GTJ6 334 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 MROH6A6NGR9 719 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 LIASO43766 372 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 RAD1O60671 282 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 STK10O94804 968 aaKnown RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 CRTAMO95727 393 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 MTHFD1P11586 935 aaKnown RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 MSH3P20585 1137 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 AKT1P31749 480 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 PRLHRP49683 370 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 SEPHS1P49903 392 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 RAB15P59190 212 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 KCTD19Q17RG1 926 aaPredicted RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 LONRF2Q1L5Z9 754 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 MEI1Q5TIA1 1274 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 CERS6Q6ZMG9 384 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 ARHGEF18Q6ZSZ5 1173 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 PRSS42Q7Z5A4 293 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 SNX20Q7Z614 316 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 SLC13A5Q86YT5 568 aaPredicted RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 TRIM48Q8IWZ4 208 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 EXTL1Q92935 676 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 CXorf40BQ96DE9 158 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 CDKN2AIPNLQ96HQ2 116 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 ASPSCR1Q9BZE9 553 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 ZCCHC2Q9C0B9 1178 aaKnown RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 ZNF768Q9H5H4 540 aaKnown RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 NLE1Q9NVX2 485 aaPredicted RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 WDR70Q9NW82 654 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 FEZ2Q9UHY8 353 aaPredicted RBP16.67■□□□□ 0.26
BRCC3-202ENST00000340647 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
BRCC3-202ENST00000340647 IGHV5-51A0A0C4DH38 117 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 GOLGA6L9A6NEM1 432 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 J3QKU1 62 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 AMD1P17707 334 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 VCLP18206 1134 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 ITGB6P18564 788 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 MC4RP32245 332 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 PPM1FP49593 454 aaPredicted RBP16.66■□□□□ 0.26
BRCC3-202ENST00000340647 POU6F1Q14863 301 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 TBR1Q16650 682 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 FAM92BQ6ZTR7 304 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 RBM12BQ8IXT5 1001 aaKnown RBP16.66■□□□□ 0.26
BRCC3-202ENST00000340647 CACNA2D3Q8IZS8 1091 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 C1orf54Q8WWF1 131 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 ZNF514Q96K75 400 aaPredicted RBP16.66■□□□□ 0.26
BRCC3-202ENST00000340647 FERMT1Q9BQL6 677 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 LRRC40Q9H9A6 602 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 ETNK1Q9HBU6 452 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 PCDHB11Q9Y5F2 797 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 PRSS21Q9Y6M0 314 aa16.66■□□□□ 0.26
BRCC3-202ENST00000340647 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
BRCC3-202ENST00000340647 OR51F1A6NGY5 319 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 TOX3O15405 576 aaPredicted RBP16.65■□□□□ 0.26
BRCC3-202ENST00000340647 STK17BO94768 372 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 TIAF1O95411 115 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 ATP1B2P14415 290 aaPredicted RBP16.65■□□□□ 0.26
BRCC3-202ENST00000340647 F8A1P23610 371 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 ACRV1P26436 265 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 P3H1Q32P28 736 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 CEACAM20Q6UY09 585 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 SERPINA9Q86WD7 417 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 UNC5BQ8IZJ1 945 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 CLDN19Q8N6F1 224 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 OR52K1Q8NGK4 314 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 PPM1MQ96MI6 270 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 ZNF778Q96MU6 729 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 PPP1R2P1Q96PQ5 205 aa16.65■□□□□ 0.26
BRCC3-202ENST00000340647 TEFMQ96QE5 360 aaKnown RBP16.65■□□□□ 0.26
BRCC3-202ENST00000340647 OR52A5Q9H2C5 316 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms