RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 IGLV3-16A0A075B6K0 115 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 TRBV5-4A0A0C4DH59 114 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 C17orf113A0A1B0GUU1 675 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 MROH6A6NGR9 719 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 C9orf172C9J069 976 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 STMND1H3BQB6 276 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 AP3B1O00203 1094 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 QSOX1O00391 747 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 C9P02748 559 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 FGF3P11487 239 aaPredicted RBP13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 ATP1B2P14415 290 aaPredicted RBP13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 AMD1P17707 334 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 ACRV1P26436 265 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 MC4RP32245 332 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 ETV5P41161 510 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 MAPK9P45984 424 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 CAPZBP47756 277 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 PRLHRP49683 370 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 RHDQ02161 417 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 CACNG1Q06432 222 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 VAC14Q08AM6 782 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 SEMA5AQ13591 1074 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 POU6F1Q14863 301 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 CYB5D1Q6P9G0 228 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 NLRP9Q7RTR0 991 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 C1orf54Q8WWF1 131 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 PEX13Q92968 403 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZDHHC12Q96GR4 267 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 DNAJC1Q96KC8 554 aaKnown RBP13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 RANBP9Q96S59 729 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 CCNL2Q96S94 520 aaPredicted RBP13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 CCM2Q9BSQ5 444 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 TBC1D10AQ9BXI6 508 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 RAB33BQ9H082 229 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 ETNK1Q9HBU6 452 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZDHHC3Q9NYG2 299 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 EPHA6Q9UF33 1036 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 RIMKLBQ9ULI2 386 aa13.07□□□□□ -0.32
SIRPB3P-201ENST00000340424 F8W8V4 182 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 TK2O00142 265 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 AP2A2O94973 939 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 FGGP02679 453 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 SLC35G4P0C7Q5 338 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 CCL4P13236 92 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 TPH1P17752 444 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 CA5AP35218 305 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 TMPRSS15P98073 1019 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 SEPT6Q14141 434 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 GPR18Q14330 331 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 NFE2L1Q14494 772 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 CLCA4Q14CN2 919 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 SIX1Q15475 284 aaPredicted RBP13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 RPE65Q16518 533 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZRANB3Q5FWF4 1079 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 DCAF12Q5T6F0 453 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZNF449Q6P9G9 518 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 CCDC81Q6ZN84 652 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 DET1Q7L5Y6 550 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 FAM129CQ86XR2 697 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 DTX1Q86Y01 620 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 HM13Q8TCT9 377 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 CRELD1Q96HD1 420 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 CDKN2AIPNLQ96HQ2 116 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 TTC1Q99614 292 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 TLR10Q9BXR5 811 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 FBXO8Q9NRD0 319 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 RAB6BQ9NRW1 208 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 SLC39A1Q9NY26 324 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 FOXJ2Q9P0K8 574 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 WDR37Q9Y2I8 494 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 JRKLQ9Y4A0 524 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 HEBP2Q9Y5Z4 205 aa13.06□□□□□ -0.32
SIRPB3P-201ENST00000340424 EFCAB7A8K855 629 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 K7ENP7 123 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 ERVH48-1M5A8F1 160 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 APRTP07741 180 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 ADRA1DP25100 572 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 MPSTP25325 297 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 NDUFS1P28331 727 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 PBLDP30039 288 aaPredicted RBP13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 MC2RQ01718 297 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 RPA4Q13156 261 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 SNX1Q13596 522 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 ITIH4Q14624 930 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 INO80CQ6PI98 192 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms