RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TSSK3Q96PN8 268 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 TESMINQ9Y4I5 508 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 H0YJX3 145 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 hCG_2039718K7EN88 272 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 UROSP10746 265 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 SLC1A2P43004 574 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
USP47-202ENST00000339865 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
USP47-202ENST00000339865 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 SLC5A7Q9GZV3 580 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PTTG2Q9NZH5 202 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
USP47-202ENST00000339865 SCN8AQ9UQD0 1980 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PALLDQ8WX93 1383 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 C22orf31O95567 290 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PLGP00747 810 aaPredicted RBP12.7□□□□□ -0.38
USP47-202ENST00000339865 LCKP06239 509 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 ITGA5P08648 1049 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 UBXN2BQ14CS0 331 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 DLG2Q15700 870 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 SNX29P2Q8IUI4 249 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 ADCY4Q8NFM4 1077 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 SLC39A8Q9C0K1 460 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 RETREG1Q9H6L5 497 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 IFNA10P01566 189 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 NUDT17P0C025 328 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 BDNFP23560 247 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 CLCN5P51795 746 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 CCNYL2Q5T2Q4 361 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 FAM171A1Q5VUB5 890 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 ZDHHC17Q8IUH5 632 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PIGXQ8TBF5 258 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 ASB15Q8WXK1 588 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 C7orf34Q96L11 122 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 SERPINB11Q96P15 392 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 FUZQ9BT04 418 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 BEX2Q9BXY8 128 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 BEX1Q9HBH7 125 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 ERVK-18Q9QC07 812 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PTPRTO14522 1441 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 A8MVJ9 347 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 EML1O00423 815 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 HSPA12AO43301 675 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 LATS1O95835 1130 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 IFNA4P05014 189 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 CD247P20963 164 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 C2orf80Q0P641 193 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 AARDQ4LEZ3 155 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 STRA6Q9BX79 667 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 OSBPL2Q9H1P3 480 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 MEAF6Q9HAF1 191 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 A0A1B0GV50 99 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 DRD4P21917 467 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 HSD11B1P28845 292 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 ZNF132P52740 706 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 PSMA6P60900 246 aaKnown RBP12.7□□□□□ -0.38
USP47-202ENST00000339865 SLC20A2Q08357 652 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 BNIP1Q12981 228 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 MCCC1Q96RQ3 725 aaPredicted RBP12.7□□□□□ -0.38
USP47-202ENST00000339865 TTYH2Q9BSA4 534 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
USP47-202ENST00000339865 FAM149AA5PLN7 773 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 TLL1O43897 1013 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 AKAP3O75969 853 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 GJB6O95452 261 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 OGNP20774 298 aaKnown RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 ATXN7L2Q5T6C5 722 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 LYPLAL1Q5VWZ2 237 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 SLC30A10Q6XR72 485 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 LENG9Q96B70 501 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 ATP13A3Q9H7F0 1226 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 TMEM185BQ9H7F4 350 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 ITGA11Q9UKX5 1188 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 SYNMO15061 1565 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 H3BUI4 141 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 DSG2Q14126 1118 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 CERCAMQ5T4B2 595 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 CPSF7Q8N684 471 aaKnown RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 MFSD3Q96ES6 412 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 OSER1Q9NX31 292 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 VNN3Q9NY84 501 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 APOC4-APOC2K7ER74 178 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 PDLIM1O00151 329 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 APOC2P02655 101 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 LRP8Q14114 963 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 SCARF1Q14162 830 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 CARD16Q5EG05 197 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 UBXN11Q5T124 520 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 IQCHQ86VS3 1027 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 ANKRD46Q86W74 232 aa12.69□□□□□ -0.38
USP47-202ENST00000339865 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
USP47-202ENST00000339865 GBA2Q9HCG7 927 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms