RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 ZMIZ1Q9ULJ6 1067 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 NIP7Q9Y221 180 aaKnown RBP eCLIP7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 PDE10AQ9Y233 779 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 DRG1Q9Y295 367 aaKnown RBP7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 CCDC61Q9Y6R9 512 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 U3KQV3 271 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 TOPAZ1Q8N9V7 1692 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 CEP350Q5VT06 3117 aa7.09□□□□□ -1.27
NDUFA4-201ENST00000339600 TRBV23-1A0A0A0MS06 115 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 hCG_1807616A0A1W2PRN6 198 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 TCRBV9S1A1TA0A576 114 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 HMX2A2RU54 273 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 TTLL8A6PVC2 850 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PCDHGA12O60330 932 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 RGS20O76081 388 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SLITRK3O94933 977 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ARIH2O95376 493 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 FBP1P09467 338 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ACSM4P0C7M7 580 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 TNNI1P19237 187 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 CYP7A1P22680 504 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 MYL9P24844 172 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 GPX4P36969 197 aaPredicted RBP7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PREPP48147 710 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 TKTL1P51854 596 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PSPHP78330 225 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PUDPQ08623 228 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 CHAF1BQ13112 559 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 CBLBQ13191 982 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SCARF1Q14162 830 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PPA1Q15181 289 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 BAK1Q16611 211 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 COL28A1Q2UY09 1125 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 KLHL12Q53G59 568 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PLA2G4FQ68DD2 849 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SMYD5Q6GMV2 418 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SLFN12LQ6IEE8 588 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PADI6Q6TGC4 694 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 CRTC1Q6UUV9 634 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PODNQ7Z5L7 613 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ZER1Q7Z7L7 766 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SLC9B2Q86UD5 537 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 CMTR2Q8IYT2 770 aaKnown RBP7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 IL17RCQ8NAC3 791 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 CHDHQ8NE62 594 aaPredicted RBP7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SLC20A1Q8WUM9 679 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 NXPE2Q96DL1 559 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SORCS2Q96PQ0 1159 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 DPYSL5Q9BPU6 564 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 FAM118BQ9BPY3 351 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 NTMT1Q9BV86 223 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PTDSS2Q9BVG9 487 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ING2Q9H160 280 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 UPF3AQ9H1J1 476 aaKnown RBP7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 DCSTAMPQ9H295 470 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ELOVL6Q9H5J4 265 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 SOX17Q9H6I2 414 aaPredicted RBP7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PCDH9Q9HC56 1237 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 MED9Q9NWA0 146 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 MTMR4Q9NYA4 1195 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 COPZ2Q9P299 210 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 TCEAL9Q9UHQ7 104 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 PEX16Q9Y5Y5 336 aa7.09□□□□□ -1.28
NDUFA4-201ENST00000339600 ROBO3Q96MS0 1386 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 PRORSD1PA6NEY8 169 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 AQP12BA6NM10 295 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 CLDN24A6NM45 220 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 SNAP23O00161 211 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 RTCAO00442 366 aaKnown RBP7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 SLC16A3O15427 465 aaKnown RBP7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 CA12O43570 354 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 NRP2O60462 931 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 EIF3GO75821 320 aaKnown RBP eCLIP7.08□□□□□ -1.286e-16■■■■■ 31.6
NDUFA4-201ENST00000339600 CNTN5O94779 1100 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 TMEM63AO94886 807 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 FAM13AO94988 1023 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 ADH1CP00326 375 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 CD63P08962 238 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 ITGAMP11215 1152 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 ETS1P14921 441 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 CTNNB1P35222 781 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 NRLP54845 237 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 CASP7P55210 303 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 EIF6P56537 245 aaKnown RBP7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 HERVK_113P63132 956 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 GTF2IP78347 998 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 EMX1Q04741 257 aaPredicted RBP7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 TROAPQ12815 778 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 IRF3Q14653 427 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 PUM1Q14671 1186 aaKnown RBP eCLIP7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 KNOP1Q1ED39 458 aaKnown RBP7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 SWI5Q1ZZU3 235 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 TMEM119Q4V9L6 283 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 TBCELQ5QJ74 424 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 LGSNQ5TDP6 509 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 KRT39Q6A163 491 aa7.08□□□□□ -1.28
NDUFA4-201ENST00000339600 CES5AQ6NT32 575 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms