RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SIRPGQ9P1W8 387 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 PCDH15Q96QU1 1955 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 TRBV23OR9-2A0A075B6M9 112 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 KIR2DS5A0A0G2JLQ3 304 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 A0A0G2JNG1 304 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 TCRBV9S1A1TA0A576 114 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 B4DGG1 531 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 E5RI56 91 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 KIR2DS3K7RE56 304 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 TNFSF14O43557 240 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 AHSGP02765 367 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 APOA4P06727 396 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CKMT2P17540 419 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 ITGB6P18564 788 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CD151P48509 253 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 PMS2P54278 862 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 MPP1Q00013 466 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 NFE2L1Q14494 772 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 KIR2DS5Q14953 304 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 TMED2Q15363 201 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 TRIP6Q15654 476 aaKnown RBP11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 ERCC6LQ2NKX8 1250 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 ZNF789Q5FWF6 425 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 AGAP9Q5VTM2 703 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 UGT3A1Q6NUS8 523 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CNSTQ6PJW8 725 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CTAGE3PQ8IX95 158 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 ARL10Q8N8L6 244 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 AVL9Q8NBF6 648 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 DEFB124Q8NES8 71 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 FBF1Q8TES7 1133 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 ASZ1Q8WWH4 475 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 TMEM159Q96B96 161 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CCDC97Q96F63 343 aaPredicted RBP11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 APOLD1Q96LR9 279 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 BIRC8Q96P09 236 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CYTH2Q99418 400 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 PRDM8Q9NQV8 689 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 NINJ2Q9NZG7 142 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM8A1Q9UBU6 413 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CORO1CQ9ULV4 474 aaPredicted RBP11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 PADI4Q9UM07 663 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 ST14Q9Y5Y6 855 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 RALGAPA1Q6GYQ0 2036 aa11.69□□□□□ -0.54
SPTLC1-202ENST00000337841 CPED1A4D0V7 1026 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM159BA6NKW6 160 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 IQCF5A8MTL0 148 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 IFRD1O00458 451 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 ZW10O43264 779 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 CBFA2T3O75081 653 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM153BP0C7A2 387 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC35G4P0C7Q5 338 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 CKMT1AP12532 417 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 CEACAM1P13688 526 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 F3P13726 295 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 SKIV2L2P42285 1042 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 NAB1Q13506 487 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 PROX2Q3B8N5 592 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM153CQ494X1 144 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 SYTL3Q4VX76 610 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 C14orf28Q4W4Y0 310 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 WDR93Q6P2C0 686 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM83HQ6ZRV2 1179 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 OTOAQ7RTW8 1153 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 KRT222Q8N1A0 295 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 ARL14Q8N4G2 192 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 GPR156Q8NFN8 814 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 MAPK15Q8TD08 544 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 NAT6Q93015 286 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 SH3KBP1Q96B97 665 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 CPNE1Q99829 537 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 CDC42EP4Q9H3Q1 356 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 STN1Q9H668 368 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 COG4Q9H9E3 785 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 LATS2Q9NRM7 1088 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 KLHL42Q9P2K6 505 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 VWA7Q9Y334 891 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM186AA6NE01 2351 aa11.68□□□□□ -0.54
SPTLC1-202ENST00000337841 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 PRR19A6NJB7 356 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 NOBOXO60393 691 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 VPS26AO75436 327 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 ACSL3O95573 720 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 VIPP01282 170 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 CDK4P11802 303 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 XRCC1P18887 633 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 AOAHP28039 575 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 GABRB3P28472 473 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 CCR7P32248 378 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms